RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 UGT1A1P22309 533 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 UGT1A4P22310 534 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CALB2P22676 271 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 LHCGRP22888 699 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 XPAP23025 273 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 RPS3P23396 243 aaKnown RBP eCLIP8.68□□□□□ -1.021e-8■■■■□ 23.6
SMAD4-206ENST00000588860 ACRV1P26436 265 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 PTPN4P29074 926 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 VIPR1P32241 457 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CA5AP35218 305 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 UGT1A3P35503 534 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 UGT1A5P35504 534 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 SLC6A11P48066 632 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ADARP55265 1226 aaKnown RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 IL2P60568 153 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ST8SIA6P61647 398 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 POLR2LP62875 67 aaKnown RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 HERVK_113P63132 956 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ELF3P78545 371 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ARHGAP8P85298 464 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 NFKB2Q00653 900 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 NHLH1Q02575 133 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 KCNC3Q14003 757 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ARHGEF7Q14155 803 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 PDGFRLQ15198 375 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 TSNQ15631 228 aaKnown RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 PDCD2Q16342 344 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 GPR33Q49SQ1 333 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 FNDC3BQ53EP0 1204 aaKnown RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 UNC50Q53HI1 259 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 SH2D4BQ5SQS7 431 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ZNF678Q5SXM1 525 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CYB5D1Q6P9G0 228 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 BRAT1Q6PJG6 821 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 FRMD7Q6ZUT3 714 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ACAD11Q709F0 780 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 RPS27LQ71UM5 84 aaKnown RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 GPR149Q86SP6 731 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CUZD1Q86UP6 607 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 LONP2Q86WA8 852 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 TREML1Q86YW5 311 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CPNE9Q8IYJ1 553 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CBARPQ8N350 705 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 GPR26Q8NDV2 337 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 RHEBL1Q8TAI7 183 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 STAG3L4Q8TBR4 150 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 EEF1AKMT1Q8WVE0 214 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 KCNJ9Q92806 393 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 PPP2R3CQ969Q6 453 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 NXPE3Q969Y0 559 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 SLC7A6OSQ96CW6 309 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 L3HYPDHQ96EM0 354 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CCDC97Q96F63 343 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ATOH8Q96SQ7 321 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CCDC106Q9BWC9 280 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 BOCQ9BWV1 1114 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ERVK-6Q9BXR3 956 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 NUF2Q9BZD4 464 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 GSTO2Q9H4Y5 243 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 SLC28A3Q9HAS3 691 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 THG1LQ9NWX6 298 aaKnown RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 TAGLN3Q9UI15 199 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CDH22Q9UJ99 828 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 IKZF3Q9UKT9 509 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CDYLQ9Y232 598 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 SLC27A6Q9Y2P4 619 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 FIS1Q9Y3D6 152 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 WASF2Q9Y6W5 498 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CKAP5Q14008 2032 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 TRBV5-4A0A0C4DH59 114 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 TSPAN11A1L157 253 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 TRPC5OSA6NMA1 111 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 SYCE1LA8MT33 242 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 UPK3BL1B0FP48 263 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 TMEM233B4DJY2 109 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 UPK3BL2E5RIL1 263 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 E9PBE3 544 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 SPECC1L-ADORA2AF8WAN1 911 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 LINC01565O15544 149 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 KLHL41O60662 606 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 SUPT7LO94864 414 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 CTSLP07711 333 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 FCARP24071 287 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 NFKBIAP25963 317 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 CPA2P48052 419 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 CLCN7P51798 805 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 PTSQ03393 145 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 PFKFB4Q16877 469 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 AAK1Q2M2I8 961 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 GAB4Q2WGN9 574 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 POM121L1PQ3SYA9 428 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 ZDHHC20Q5W0Z9 365 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 NXNQ6DKJ4 435 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 RINLQ6ZS11 566 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 RFLNAQ6ZTI6 216 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 ETFBKMTQ8IXQ9 262 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 NXPE1Q8N323 547 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 FBXO39Q8N4B4 442 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 ZNF366Q8N895 744 aa8.67□□□□□ -1.02
SMAD4-206ENST00000588860 KDM1BQ8NB78 822 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms