RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 WASH6PQ9NQA3 447 aa21.41■■□□□ 1.02
CAPNS1-205ENST00000588780 SAMSN1Q9NSI8 373 aaKnown RBP21.41■■□□□ 1.02
CAPNS1-205ENST00000588780 POT1Q9NUX5 634 aa21.41■■□□□ 1.02
CAPNS1-205ENST00000588780 PKD2L2Q9NZM6 624 aa21.41■■□□□ 1.02
CAPNS1-205ENST00000588780 TRIM10Q9UDY6 481 aa21.41■■□□□ 1.02
CAPNS1-205ENST00000588780 SSU72P8A0A1W2PR75 194 aa21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 F5H423 210 aaPredicted RBP21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 CPNE3O75131 537 aaKnown RBP21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 EBLN1P0CF75 366 aa21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 LPOP22079 712 aaPredicted RBP21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 RPL10P27635 214 aaKnown RBP21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 MIPP30301 263 aa21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 GPR18Q14330 331 aa21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 FKBP15Q5T1M5 1219 aa21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 LPCAT1Q8NF37 534 aa21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 CCHCR1Q8TD31 782 aa21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 UBXN4Q92575 508 aa21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 FGF21Q9NSA1 209 aa21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 PARVAQ9NVD7 372 aa21.4■■□□□ 1.02
CAPNS1-205ENST00000588780 IGHV5-51A0A0C4DH38 117 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 TMCO5BA8MYB1 307 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 EPHB6O15197 1021 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 FZD6O60353 706 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 SCRG1O75711 98 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 CEACAM4O75871 244 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 SLC25A14O95258 325 aaPredicted RBP21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 KLK3P07288 261 aaPredicted RBP21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 CA4P22748 312 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 EEF1GP26641 437 aaKnown RBP21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 SPINT3P49223 89 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 CLCNKAP51800 687 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 ITGA1P56199 1179 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 ACAD10Q6JQN1 1059 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 BPHLQ86WA6 291 aaPredicted RBP21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 SPATA16Q9BXB7 569 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 POLR1EQ9GZS1 481 aaKnown RBP21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 ETNK2Q9NVF9 386 aa21.39■■□□□ 1.01
CAPNS1-205ENST00000588780 OR52A4PA6NMU1 304 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 ATMINO43313 823 aaPredicted RBP21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 PPP1CAP62136 330 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 MAMLD1Q13495 774 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 PLEKHN1Q494U1 663 aaPredicted RBP21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 ANKRD20A8PQ5CZ79 823 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 ZNF569Q5MCW4 686 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 HENMT1Q5T8I9 393 aaKnown RBP21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 PSTKQ8IV42 348 aaKnown RBP21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 ARFGAP1Q8N6T3 406 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 ZNF514Q96K75 400 aaPredicted RBP21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 WDR24Q96S15 920 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 ILKAPQ9H0C8 392 aaPredicted RBP21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 CHST8Q9H2A9 424 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 SLC40A1Q9NP59 571 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 EPHA6Q9UF33 1036 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 SLC23A2Q9UGH3 650 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 FBN2P35556 2912 aa21.38■■□□□ 1.01
CAPNS1-205ENST00000588780 ZNF7P17097 686 aaPredicted RBP21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 SERPINB6P35237 376 aa21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 DRG2P55039 364 aaKnown RBP21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 RRADP55042 308 aa21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 DSC2Q02487 901 aa21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 ALS2CLQ60I27 953 aa21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 RBM12BQ8IXT5 1001 aaKnown RBP21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 ENDOVQ8N8Q3 282 aaKnown RBP21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 TMEM102Q8N9M5 508 aaPredicted RBP21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 HSPH1Q92598 858 aa21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 ZNF653Q96CK0 615 aa21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 SLC41A2Q96JW4 573 aa21.37■■□□□ 1.01
CAPNS1-205ENST00000588780 UBA6A0AVT1 1052 aaPredicted RBP21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 KMOO15229 486 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 PRF1P14222 555 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 IDSP22304 550 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 VAV2P52735 878 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 GPS2Q13227 327 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 SMTNL2Q2TAL5 461 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 DPCR1Q3MIW9 517 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 LYPLAL1Q5VWZ2 237 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 KLHL35Q6PF15 583 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 CERS6Q6ZMG9 384 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 MED25Q71SY5 747 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 LRRTM4Q86VH4 590 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 RAVER1Q8IY67 606 aaKnown RBP21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 NEK11Q8NG66 645 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 SGSM3Q96HU1 749 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 TRIM39Q9HCM9 518 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 HAUS2Q9NVX0 235 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 B3GNT3Q9Y2A9 372 aa21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 COPG1Q9Y678 874 aaKnown RBP21.36■■□□□ 1.01
CAPNS1-205ENST00000588780 GRNP28799 593 aaKnown RBP21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 HALP42357 657 aa21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 PER3P56645 1201 aa21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 PLCL1Q15111 1095 aa21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 DNTTIP2Q5QJE6 756 aaKnown RBP21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 FAM69BQ5VUD6 431 aa21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 IZUMO3Q5VZ72 239 aa21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 RANBP9Q96S59 729 aa21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 MAP3K3Q99759 626 aa21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 TDRD1Q9BXT4 1180 aaKnown RBP21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 UNKQ9C0B0 810 aaKnown RBP21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 RUBCNLQ9H714 662 aa21.35■■□□□ 1.01
CAPNS1-205ENST00000588780 PCDH9Q9HC56 1237 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms