RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PTERQ96BW5 349 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 SGF29Q96ES7 293 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 LINGO1Q96FE5 620 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 TFB2MQ9H5Q4 396 aaKnown RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 ALG9Q9H6U8 611 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 SARS2Q9NP81 518 aaKnown RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 THAP1Q9NVV9 213 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 KLHL14Q9P2G3 628 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 COQ6Q9Y2Z9 468 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 DHRS7Q9Y394 339 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 A0A1W2PQF6 199 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 A8MT66 165 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 CFAP99D6REC4 459 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 F8W8V4 182 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 TSPAN6O43657 245 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 LZTS3O60299 673 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 MMP20O60882 483 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 SLC25A14O95258 325 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 TGDSO95455 350 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 OR56A5P0C7T3 313 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 ITGB6P18564 788 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 AKT1P31749 480 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 IL2P60568 153 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 CCDC15Q0P6D6 951 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 ASPHQ12797 758 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 SF3A3Q12874 501 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 OVGP1Q12889 678 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 TDGQ13569 410 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 FBXO43Q4G163 708 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 CRLF3Q8IUI8 442 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 ZBTB2Q8N680 514 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 ANKS4BQ8N8V4 417 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 NAT14Q8WUY8 206 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 INPP5DQ92835 1189 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 GLYATL1Q969I3 302 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 FAM131CQ96AQ9 280 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 CCDC126Q96EE4 140 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 DCUN1D1Q96GG9 259 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 PANX3Q96QZ0 392 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 GATA5Q9BWX5 397 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-205ENST00000588745 CD248Q9HCU0 757 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 F5P12259 2224 aa11.28□□□□□ -0.6
SMAD4-205ENST00000588745 A0A1W2PP55 124 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 CCDC189A1A4V9 331 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 NPEPPSL1A6NEC2 478 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 NEMP2A6NFY4 417 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 SHISA7A6NL88 538 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 EBAG9O00559 213 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 ITM2AO43736 263 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 MAGEC1O60732 1142 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 KERAO60938 352 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 LYPLA1O75608 230 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-205ENST00000588745 AP2A2O94973 939 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 TRIM16O95361 564 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 SOD1P00441 154 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 DNTTP04053 509 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 IL9P15248 144 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 MSH3P20585 1137 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 SLC1A6P48664 564 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 TAS2R38P59533 333 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 DNAJB13P59910 316 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 ABCE1P61221 599 aaKnown RBP11.27□□□□□ -0.61
SMAD4-205ENST00000588745 NFKB2Q00653 900 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 DPTQ07507 201 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 CCINQ13939 588 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 OR4D1Q15615 310 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 PUS10Q3MIT2 529 aaKnown RBP11.27□□□□□ -0.61
SMAD4-205ENST00000588745 TTLL9Q3SXZ7 439 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 HSF5Q4G112 596 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-205ENST00000588745 LDLRAP1Q5SW96 308 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 RAET1GQ6H3X3 334 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-205ENST00000588745 NAPRTQ6XQN6 538 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 SPATS2Q86XZ4 545 aaKnown RBP11.27□□□□□ -0.61
SMAD4-205ENST00000588745 PHYKPLQ8IUZ5 450 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 SLC22A9Q8IVM8 553 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 HDDC3Q8N4P3 179 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 BTN2A2Q8WVV5 523 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 FAM3CQ92520 227 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 KIAA1191Q96A73 305 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 PDLIM5Q96HC4 596 aaKnown RBP11.27□□□□□ -0.61
SMAD4-205ENST00000588745 ATOH8Q96SQ7 321 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 SORT1Q99523 831 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 TRIM55Q9BYV6 548 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 C20orf27Q9GZN8 174 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 MKRN2Q9H000 416 aaKnown RBP11.27□□□□□ -0.61
SMAD4-205ENST00000588745 ZNF395Q9H8N7 513 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-205ENST00000588745 NPHS2Q9NP85 383 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 LATS2Q9NRM7 1088 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 SPATS2LQ9NUQ6 558 aaKnown RBP11.27□□□□□ -0.61
SMAD4-205ENST00000588745 SERGEFQ9UGK8 458 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 IKZF3Q9UKT9 509 aa11.27□□□□□ -0.61
SMAD4-205ENST00000588745 LOC730098B7Z3J9 87 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 QSOX1O00391 747 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 BTN3A1O00481 513 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 SMIM24O75264 130 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 MTX2O75431 263 aa11.26□□□□□ -0.61
SMAD4-205ENST00000588745 RNASEH2AO75792 299 aaKnown RBP11.26□□□□□ -0.61
SMAD4-205ENST00000588745 IPO13O94829 963 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms