RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 GJC1P36383 396 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 PPARGP37231 505 aaPredicted RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 CDKN2BP42772 138 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 MAGEA6P43360 314 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 HK2P52789 917 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 AQP5P55064 265 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 KRTAP10-9P60411 292 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 MYBPC1Q00872 1141 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 FOLH1Q04609 750 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 YWHAHQ04917 246 aaPredicted RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 SOX4Q06945 474 aaPredicted RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 STX3Q13277 289 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 NCOA4Q13772 614 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 PIGHQ14442 188 aaPredicted RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 KCNJ11Q14654 390 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 STARD3Q14849 445 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 HERC3Q15034 1050 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 TLR1Q15399 786 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CHI3L2Q15782 390 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CNGA3Q16281 694 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 SNRNP35Q16560 246 aaKnown RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 MYLK3Q32MK0 819 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 FUT11Q495W5 492 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 KCTD21Q4G0X4 260 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 PRR30Q53SZ7 412 aaPredicted RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 FSCBQ5H9T9 825 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 LPCAT4Q643R3 524 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 DNAJC24Q6P3W2 148 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 C16orf89Q6UX73 402 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 RNF111Q6ZNA4 994 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CAPN12Q6ZSI9 719 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 BBS12Q6ZW61 710 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CCDC80Q76M96 950 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 NIPA1Q7RTP0 329 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 MON1AQ86VX9 555 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 ZFAND4Q86XD8 727 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 ANKMY2Q8IV38 441 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CHERPQ8IWX8 916 aaKnown RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 PALM2Q8IXS6 379 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 FBXW8Q8N3Y1 598 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 SLC25A41Q8N5S1 370 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 LZTR1Q8N653 840 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 ARL14EPQ8N8R7 260 aaPredicted RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 APPL2Q8NEU8 664 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 BEST2Q8NFU1 509 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 TNIP2Q8NFZ5 429 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CEP70Q8NHQ1 597 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 FBXO27Q8NI29 283 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 PIWIL2Q8TC59 973 aaKnown RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 IFI44Q8TCB0 444 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 ACMSDQ8TDX5 336 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 SLC26A7Q8TE54 656 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 DQX1Q8TE96 717 aaKnown RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 C17orf50Q8WW18 174 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 EDARADDQ8WWZ3 215 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 PYDC1Q8WXC3 89 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CPT1BQ92523 772 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 SEMA4DQ92854 862 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 BORCS5Q969J3 196 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 SLC35B4Q969S0 331 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 BIRC7Q96CA5 298 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 SIPA1Q96FS4 1042 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 SERAC1Q96JX3 654 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CLPTM1LQ96KA5 538 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 DNAJC1Q96KC8 554 aaKnown RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 UROC1Q96N76 676 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 GABRG3Q99928 467 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 C11orf70Q9BRQ4 267 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CBWD1Q9BRT8 395 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 LXNQ9BS40 222 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 HEMGNQ9BXL5 484 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 SLC12A9Q9BXP2 914 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 MKRN2Q9H000 416 aaKnown RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 IKZF4Q9H2S9 585 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 POPDC2Q9HBU9 364 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 ACP6Q9NPH0 428 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 ITM2CQ9NQX7 267 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 PNPLA3Q9NST1 481 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 TBC1D22BQ9NU19 505 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 PARVAQ9NVD7 372 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 THAP1Q9NVV9 213 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CHORDC1Q9UHD1 332 aaPredicted RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 GDF2Q9UK05 429 aaPredicted RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 ARHGAP26Q9UNA1 814 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 FAF1Q9UNN5 650 aaPredicted RBP4.15□□□□□ -1.75
LIG3-211ENST00000588713 POMPQ9Y244 141 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 PLLPQ9Y342 182 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 PCDHGB6Q9Y5F9 930 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 TEX264Q9Y6I9 313 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 CEPT1Q9Y6K0 416 aa4.15□□□□□ -1.75
LIG3-211ENST00000588713 KNL1Q8NG31 2342 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 hCG_2014768A0A024R1R8 64 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 CCDC187A0A096LP49 1063 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 A0A0A0MRY4 1105 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 GOLGA8QA0A0J9YX86 632 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 PRSS51A0A1B0GVH4 220 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 TCRBV5S1A1TA0A578 114 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 GOLGA8OA6NCC3 632 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 TRIM49D1C9J1S8 452 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 GOLGA8NF8WBI6 632 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms