RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 NUP210LQ5VU65 1888 aa6.72□□□□□ -1.33
TPM4-210ENST00000588507 ANKRD12Q6UB98 2062 aa6.72□□□□□ -1.33
TPM4-210ENST00000588507 USP27XA6NNY8 438 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 CLCA1A8K7I4 914 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 SNX2O60749 519 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 SOX30O94993 753 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 STATHP02808 62 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 RPN1P04843 607 aaKnown RBP6.71□□□□□ -1.34
TPM4-210ENST00000588507 UMODP07911 640 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 EPXP11678 715 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 F3P13726 295 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 FDPSP14324 419 aaKnown RBP6.71□□□□□ -1.34
TPM4-210ENST00000588507 GJB2P29033 226 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 UQCRC1P31930 480 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 MMP12P39900 470 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 NUP107P57740 925 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 UBE2IP63279 158 aaKnown RBP6.71□□□□□ -1.34
TPM4-210ENST00000588507 ARF5P84085 180 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 CDK3Q00526 305 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 ABRQ12979 859 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 CAPRIN1Q14444 709 aaKnown RBP6.71□□□□□ -1.34
TPM4-210ENST00000588507 UGP2Q16851 508 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 ZNF394Q53GI3 561 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 SPOPLQ6IQ16 392 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 DOK6Q6PKX4 331 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 CD163Q86VB7 1156 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 TMTC1Q8IUR5 882 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.71□□□□□ -1.34
TPM4-210ENST00000588507 SLC2A13Q96QE2 648 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 TRIM51Q9BSJ1 452 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 GSX2Q9BZM3 304 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 TRIM7Q9C029 511 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 SHARPINQ9H0F6 387 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 L2HGDHQ9H9P8 463 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 FANCEQ9HB96 536 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 TMEM160Q9NX00 188 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 NDOR1Q9UHB4 597 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 HRH3Q9Y5N1 445 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 ACTL7AQ9Y615 435 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 VWFP04275 2813 aa6.71□□□□□ -1.34
TPM4-210ENST00000588507 SYT5O00445 386 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 TTI1O43156 1089 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 CD160O95971 181 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 VIPP01282 170 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 IGHDP01880 384 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 FYNP06241 537 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 SLC2A3P11169 496 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 GAP43P17677 238 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 SRD5A1P18405 259 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 CYP2A7P20853 494 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 MMP11P24347 488 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 PSMA5P28066 241 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 PTGS2P35354 604 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 SOX11P35716 441 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 PRPHP41219 470 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 ZFP36L2P47974 494 aaKnown RBP6.7□□□□□ -1.34
TPM4-210ENST00000588507 COMPP49747 757 aaPredicted RBP6.7□□□□□ -1.34
TPM4-210ENST00000588507 CASP5P51878 434 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 HNRNPUQ00839 825 aaKnown RBP eCLIP6.7□□□□□ -1.34
TPM4-210ENST00000588507 TAP2Q03519 686 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 BST2Q10589 180 aaKnown RBP6.7□□□□□ -1.34
TPM4-210ENST00000588507 GOLGA7BQ2TAP0 167 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 SLC25A35Q3KQZ1 300 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 TUBB8Q3ZCM7 444 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 C5orf22Q49AR2 442 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 ZFYVE27Q5T4F4 411 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 ZNF385CQ66K41 422 aaPredicted RBP6.7□□□□□ -1.34
TPM4-210ENST00000588507 TREML4Q6UXN2 200 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 GALNT13Q8IUC8 556 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 MCATQ8IVS2 390 aaKnown RBP6.7□□□□□ -1.34
TPM4-210ENST00000588507 SIAH3Q8IW03 269 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 OR10Q1Q8NGQ4 319 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 CCDC110Q8TBZ0 833 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 HCAR2Q8TDS4 363 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 ZBED6CLQ96FA7 236 aaPredicted RBP6.7□□□□□ -1.34
TPM4-210ENST00000588507 VPS50Q96JG6 964 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 PLEKHG4BQ96PX9 1271 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 KCNK17Q96T54 332 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 CCL19Q99731 98 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 SLC6A16Q9GZN6 736 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 TP63Q9H3D4 680 aaPredicted RBP6.7□□□□□ -1.34
TPM4-210ENST00000588507 C12orf65Q9H3J6 166 aaKnown RBP6.7□□□□□ -1.34
TPM4-210ENST00000588507 NOL6Q9H6R4 1146 aaKnown RBP6.7□□□□□ -1.34
TPM4-210ENST00000588507 ATP13A1Q9HD20 1204 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 BLOC1S4Q9NUP1 217 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 HESX1Q9UBX0 185 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 CDC23Q9UJX2 597 aa6.7□□□□□ -1.34
TPM4-210ENST00000588507 A0A1W2PPR1 153 aa6.69□□□□□ -1.34
TPM4-210ENST00000588507 UBA6A0AVT1 1052 aaPredicted RBP6.69□□□□□ -1.34
TPM4-210ENST00000588507 GRID2IPA4D2P6 1211 aa6.69□□□□□ -1.34
TPM4-210ENST00000588507 USP1O94782 785 aa6.69□□□□□ -1.34
TPM4-210ENST00000588507 RHOBTB3O94955 611 aa6.69□□□□□ -1.34
TPM4-210ENST00000588507 LCA5LO95447 670 aa6.69□□□□□ -1.34
TPM4-210ENST00000588507 CTDNEP1O95476 244 aa6.69□□□□□ -1.34
TPM4-210ENST00000588507 WDPCPO95876 746 aa6.69□□□□□ -1.34
TPM4-210ENST00000588507 HRGP04196 525 aa6.69□□□□□ -1.34
TPM4-210ENST00000588507 HBQ1P09105 142 aa6.69□□□□□ -1.34
TPM4-210ENST00000588507 ELFN1P0C7U0 828 aa6.69□□□□□ -1.34
TPM4-210ENST00000588507 XRCC1P18887 633 aaPredicted RBP6.69□□□□□ -1.34
TPM4-210ENST00000588507 TACR1P25103 407 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms