RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SLC18A3Q16572 532 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 CCDC70Q6NSX1 233 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 IRGCQ6NXR0 463 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 FAM92BQ6ZTR7 304 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 TMEM26Q6ZUK4 368 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 TTC30BQ8N4P2 665 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 ESX1Q8N693 406 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 GALNT6Q8NCL4 622 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 RSC1A1Q92681 617 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
HDAC5-208ENST00000588419 STAMBPL1Q96FJ0 436 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 IMP4Q96G21 291 aaKnown RBP13.5□□□□□ -0.25
HDAC5-208ENST00000588419 C9orf72Q96LT7 481 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 TRIT1Q9H3H1 467 aaKnown RBP13.5□□□□□ -0.25
HDAC5-208ENST00000588419 RAD18Q9NS91 495 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 OGFRQ9NZT2 677 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 LNPEPQ9UIQ6 1025 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 CROTQ9UKG9 612 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 NENFQ9UMX5 172 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 TMEM184BQ9Y519 407 aaPredicted RBP13.5□□□□□ -0.25
HDAC5-208ENST00000588419 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.5□□□□□ -0.25
HDAC5-208ENST00000588419 ADGRG1Q9Y653 693 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 SLC30A1Q9Y6M5 507 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 RPS6KL1Q9Y6S9 549 aa13.5□□□□□ -0.25
HDAC5-208ENST00000588419 KIAA0754O94854 1291 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 CDK14O94921 469 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 BPIP17213 487 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 NR1D1P20393 614 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 PBLDP30039 288 aaPredicted RBP13.49□□□□□ -0.25
HDAC5-208ENST00000588419 SLC19A1P41440 591 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 STAT5AP42229 794 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 DCDC1P59894 354 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 MC1RQ01726 317 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 CDK18Q07002 472 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 SEPT6Q14141 434 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 NOMO1Q15155 1222 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 LLGL1Q15334 1064 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 KHDC1Q4VXA5 237 aaKnown RBP13.49□□□□□ -0.25
HDAC5-208ENST00000588419 CACHD1Q5VU97 1274 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 SLC35G2Q8TBE7 412 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 APOBEC4Q8WW27 367 aaKnown RBP13.49□□□□□ -0.25
HDAC5-208ENST00000588419 TRIB3Q96RU7 358 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 XPO4Q9C0E2 1151 aaKnown RBP13.49□□□□□ -0.25
HDAC5-208ENST00000588419 SLC25A51Q9H1U9 297 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 MAGEE1Q9HCI5 957 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 SPTLC3Q9NUV7 552 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 SIDT1Q9NXL6 827 aaKnown RBP13.49□□□□□ -0.25
HDAC5-208ENST00000588419 ZNF624Q9P2J8 865 aaPredicted RBP13.49□□□□□ -0.25
HDAC5-208ENST00000588419 LCMT1Q9UIC8 334 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 HYOU1Q9Y4L1 999 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 SPO11Q9Y5K1 396 aa13.49□□□□□ -0.25
HDAC5-208ENST00000588419 A0A0A6YYK5 440 aaPredicted RBP13.48□□□□□ -0.25
HDAC5-208ENST00000588419 AURKAO14965 403 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 KIF1CO43896 1103 aaKnown RBP13.48□□□□□ -0.25
HDAC5-208ENST00000588419 NDUFA10O95299 355 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 TPM3P06753 285 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 ANKRD34CP0C6C1 535 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 TMEM253P0C7T8 217 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 XRCC1P18887 633 aaPredicted RBP13.48□□□□□ -0.25
HDAC5-208ENST00000588419 IDSP22304 550 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 F8A1P23610 371 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 TNNT3P45378 269 aaPredicted RBP13.48□□□□□ -0.25
HDAC5-208ENST00000588419 ERV3-1Q14264 604 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 GPR18Q14330 331 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 IGFBP7Q16270 282 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 LACTB2Q53H82 288 aaPredicted RBP13.48□□□□□ -0.25
HDAC5-208ENST00000588419 KAZNQ674X7 775 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 PDPK2PQ6A1A2 396 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 SLC9A4Q6AI14 798 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 C6orf15Q6UXA7 325 aaPredicted RBP13.48□□□□□ -0.25
HDAC5-208ENST00000588419 TMC3Q7Z5M5 1100 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 SLC25A41Q8N5S1 370 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 ABHD17AQ96GS6 310 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 TTC25Q96NG3 672 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 TIMM29Q9BSF4 260 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 ANP32EQ9BTT0 268 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 SPRY4Q9C004 299 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 ZNF768Q9H5H4 540 aaKnown RBP13.48□□□□□ -0.25
HDAC5-208ENST00000588419 GLOD4Q9HC38 313 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 POT1Q9NUX5 634 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 ZNHIT6Q9NWK9 470 aaKnown RBP13.48□□□□□ -0.25
HDAC5-208ENST00000588419 TUBD1Q9UJT1 453 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 PSMD13Q9UNM6 376 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 TP53TG5Q9Y2B4 290 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 PCDHB3Q9Y5E6 796 aa13.48□□□□□ -0.25
HDAC5-208ENST00000588419 CDC14CA4D256 554 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 C3orf70A6NLC5 250 aaPredicted RBP13.47□□□□□ -0.25
HDAC5-208ENST00000588419 GPR89AB7ZAQ6 455 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 CHUKO15111 745 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 GPR39O43194 453 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 VEGFDO43915 354 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 NDST3O95803 873 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 C9P02748 559 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 GPR89BP0CG08 455 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 BRAFP15056 766 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 ZFXP17010 805 aaPredicted RBP13.47□□□□□ -0.25
HDAC5-208ENST00000588419 VCLP18206 1134 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 HALP42357 657 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 CAPZBP47756 277 aa13.47□□□□□ -0.25
HDAC5-208ENST00000588419 CLCNKAP51800 687 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms