RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	CDH2	P19022	906 aa	Predicted RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	CHRNA4	P43681	627 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	MPP1	Q00013	466 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	SLC25A3	Q00325	362 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	PRKCQ	Q04759	706 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ARL13A	Q5H913	290 aa	Predicted RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	HIPK4	Q8NE63	616 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	PHF12	Q96QT6	1004 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	SLC25A51	Q9H1U9	297 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	CWH43	Q9H720	699 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	TRIM39	Q9HCM9	518 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	NSMCE4A	Q9NXX6	385 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ABI2	Q9NYB9	513 aa	Predicted RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	AAR2	Q9Y312	384 aa	Known RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	TLL2	Q9Y6L7	1015 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928		A0A1W2PQ72	361 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	SEPT4	O43236	478 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	GJB3	O75712	270 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	CPB1	P15086	417 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	CES1	P23141	567 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	RING1	Q06587	406 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	HSPA14	Q0VDF9	509 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	FSCB	Q5H9T9	825 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	DHRS4L2	Q6PKH6	230 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	TOP1MT	Q969P6	601 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	PTER	Q96BW5	349 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	LENG8	Q96PV6	779 aa	Predicted RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	PNPLA3	Q9NST1	481 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	PKD2L2	Q9NZM6	624 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	GABRQ	Q9UN88	632 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928		A0A1B0GTL3	188 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ALX3	O95076	343 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	JCHAIN	P01591	159 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	APOA4	P06727	396 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	GPX3	P22352	226 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	CCR1	P32246	355 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	KDSR	Q06136	332 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	UGP2	Q16851	508 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	LHX8	Q68G74	356 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	PCYOX1L	Q8NBM8	494 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	LRRC20	Q8TCA0	184 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ADAMTS16	Q8TE57	1224 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ZNF486	Q96H40	463 aa	Predicted RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	MGME1	Q9BQP7	344 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ARHGAP39	Q9C0H5	1083 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	RMND5A	Q9H871	391 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ABCC13	Q9NSE7	274 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ARHGAP26	Q9UNA1	814 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	MEI4	A8MW99	385 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	PSMD12	O00232	456 aa	Predicted RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	SNPH	O15079	494 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	LINC00271	P0C7V0	271 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	KPNA1	P52294	538 aa	Predicted RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	RAB10	P61026	200 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	RPS3A	P61247	264 aa	Known RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	KIAA0040	Q15053	153 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	SPOUT1	Q5T280	376 aa	Known RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	RBM20	Q5T481	1227 aa	Known RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	PM20D2	Q8IYS1	436 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	LINC00469	Q8N7U9	141 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	ADCY4	Q8NFM4	1077 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	IGSF8	Q969P0	613 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	NEURL2	Q9BR09	285 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	OR51B4	Q9Y5P0	310 aa		10.82	□□□□□ -0.68
ILF3-208	ENST00000587928	HDAC3	O15379	428 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	FZD6	O60353	706 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	TRIM13	O60858	407 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	ABCB1	P08183	1280 aa	Predicted RBP	10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	KIT	P10721	976 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	TFEB	P19484	476 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	PKLR	P30613	574 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	ARSD	P51689	593 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	AQP4	P55087	323 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	CBX2	Q14781	532 aa	Predicted RBP	10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	KANK2	Q63ZY3	851 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	GPR155	Q7Z3F1	870 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	ZNF280B	Q86YH2	543 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	CCDC103	Q8IW40	242 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	PAPD5	Q8NDF8	572 aa	Known RBP	10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	PPHLN1	Q8NEY8	458 aa	Known RBP	10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	MRPL40	Q9NQ50	206 aa	Known RBP	10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	ZNF221	Q9UK13	617 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	SEMA3D	O95025	777 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	HSPA4L	O95757	839 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	ASGR1	P07306	291 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	RAG1	P15918	1043 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	PIK3R1	P27986	724 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	CRHR2	Q13324	411 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	SMAD1	Q15797	465 aa	Known RBP	10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	ALF	Q53S48	1182 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	FAM45BP	Q6NSW5	357 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	METTL25	Q8N6Q8	603 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	FAM45A	Q8TCE6	357 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	HM13	Q8TCT9	377 aa		10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	CIDEC	Q96AQ7	238 aa	Predicted RBP	10.81	□□□□□ -0.68
ILF3-208	ENST00000587928	CMTM5	Q96DZ9	223 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms