RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 POLR2LP62875 67 aaKnown RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 ILF2Q12905 390 aaKnown RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 STX3Q13277 289 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 ITGA9Q13797 1035 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 ELAVL3Q14576 367 aaKnown RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 LPAL2Q16609 132 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 SETMARQ53H47 684 aaPredicted RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 ATG16L1Q676U5 607 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 LAIR1Q6GTX8 287 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 PIGWQ7Z7B1 504 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 TTC7BQ86TV6 843 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 MMAAQ8IVH4 418 aaKnown RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 ZNF687Q8N1G0 1237 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 NXPE1Q8N323 547 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 ZNF513Q8N8E2 541 aaPredicted RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 SIDT2Q8NBJ9 832 aaKnown RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 TXNDC5Q8NBS9 432 aaKnown RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 TMIEQ8NEW7 156 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 GIMAP7Q8NHV1 300 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 RFWD2Q8NHY2 731 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 FAM3CQ92520 227 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 EXT2Q93063 718 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 FAM129BQ96TA1 746 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 P2RY13Q9BPV8 354 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 IER2Q9BTL4 223 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 SPATA16Q9BXB7 569 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 ABCG8Q9H221 673 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 CHRDQ9H2X0 955 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 POPDC3Q9HBV1 291 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 SARS2Q9NP81 518 aaKnown RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 NPHS2Q9NP85 383 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 PRSS16Q9NQE7 514 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 ACSS2Q9NR19 701 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 PPM1HQ9ULR3 514 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 CACNA1IQ9P0X4 2223 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 NPEPPSL1A6NEC2 478 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 IQCF5A8MTL0 148 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 TARM1B6A8C7 271 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 E5RI56 91 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 C1QTNF3-AMACRE9PGA6 284 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 SPECC1L-ADORA2AF8WAN1 911 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 H3BMM5 538 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 PRMT5O14744 637 aaPredicted RBP10.07□□□□□ -0.8
APOC1-201ENST00000586638 ITM2AO43736 263 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 ZBTB14O43829 449 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 EGFP01133 1207 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 RETP07949 1114 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 ELFN1P0C7U0 828 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 RALBP11234 206 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 ADRB3P13945 408 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 CD1DP15813 335 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 GM2AP17900 193 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 RPS3P23396 243 aaKnown RBP eCLIP10.07□□□□□ -0.81e-14■■■□□ 18
APOC1-201ENST00000586638 NFKBIAP25963 317 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 ARRB2P32121 409 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 ETV3P41162 512 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 PTGER3P43115 390 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 CXCL12P48061 93 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 GALK1P51570 392 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 CCR3P51677 355 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 OCRLQ01968 901 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 ACOX1Q15067 660 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 PON2Q15165 354 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 FAM83EQ2M2I3 478 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 PREPLQ4J6C6 727 aaPredicted RBP10.07□□□□□ -0.8
APOC1-201ENST00000586638 ATP13A5Q4VNC0 1218 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 AGAP9Q5VTM2 703 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 PTRHD1Q6GMV3 140 aaKnown RBP10.07□□□□□ -0.8
APOC1-201ENST00000586638 ERAP2Q6P179 960 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 KLC3Q6P597 504 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 PAQR3Q6TCH7 311 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 LIPIQ6XZB0 460 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 PRR23BQ6ZRT6 265 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 LCA5Q86VQ0 697 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 CPNE9Q8IYJ1 553 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 RBFAQ8N0V3 343 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 TMEM151AQ8N4L1 468 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 RDH11Q8TC12 318 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 ZNF398Q8TD17 642 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 CD200R1Q8TD46 325 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 C10orf82Q8WW14 230 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 PTERQ96BW5 349 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 ULK4Q96C45 1275 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 GRAMD1AQ96CP6 724 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 PPP1R16AQ96I34 528 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 UBXN10Q96LJ8 280 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 PLEKHG4BQ96PX9 1271 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 C19orf43Q9BQ61 176 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 C20orf27Q9GZN8 174 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 CLPBQ9H078 707 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 MRPL46Q9H2W6 279 aaKnown RBP10.07□□□□□ -0.8
APOC1-201ENST00000586638 ALG9Q9H6U8 611 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 TRPV5Q9NQA5 729 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 TAS2R13Q9NYV9 303 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 SUN2Q9UH99 717 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 TRMT6Q9UJA5 497 aaKnown RBP10.07□□□□□ -0.8
APOC1-201ENST00000586638 GNPTGQ9UJJ9 305 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 IKZF3Q9UKT9 509 aa10.07□□□□□ -0.8
APOC1-201ENST00000586638 TMPRSS11EQ9UL52 423 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms