RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 ELK3P41970 407 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 CDKN1CP49918 316 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-205ENST00000585920 SLC14A1Q13336 389 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 C1orf61Q13536 156 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 SHBQ15464 509 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 PRRT3Q5FWE3 981 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 STPG1Q5TH74 334 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 LYPLAL1Q5VWZ2 237 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 KIAA0930Q6ICG6 404 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-205ENST00000585920 ZDHHC24Q6UX98 284 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 CERS6Q6ZMG9 384 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 SDCCAG8Q86SQ7 713 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-205ENST00000585920 SERPINA9Q86WD7 417 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 GALNT13Q8IUC8 556 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 IFT20Q8IY31 132 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 RBFAQ8N0V3 343 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 NXPE1Q8N323 547 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 FBXO25Q8TCJ0 367 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 KCTD12Q96CX2 325 aaKnown RBP12.94□□□□□ -0.34
DNMT1-205ENST00000585920 SCARF2Q96GP6 870 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-205ENST00000585920 SGSM3Q96HU1 749 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 FCRL3Q96P31 734 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-205ENST00000585920 COPS8Q99627 209 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 RHOXF2Q9BQY4 288 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 TRIM56Q9BRZ2 755 aaKnown RBP12.94□□□□□ -0.34
DNMT1-205ENST00000585920 FOXP3Q9BZS1 431 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 TCEAL2Q9H3H9 227 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-205ENST00000585920 CATSPERZQ9NTU4 200 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 ZDHHC3Q9NYG2 299 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 MAP10Q9P2G4 905 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 ZC3H7BQ9UGR2 993 aaKnown RBP12.94□□□□□ -0.34
DNMT1-205ENST00000585920 PNMA8BQ9ULN7 279 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-205ENST00000585920 CHMP2BQ9UQN3 213 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 PCDHGB2Q9Y5G2 931 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 LRRK1Q38SD2 2015 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 OTOGLQ3ZCN5 2332 aa12.94□□□□□ -0.34
DNMT1-205ENST00000585920 TRBV5-4A0A0C4DH59 114 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 GPR89AB7ZAQ6 455 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 E7ESA3 106 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 EIF3HO15372 352 aaKnown RBP eCLIP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 CD3EAPO15446 510 aaKnown RBP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 GRID2O43424 1007 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 PCDHGA12O60330 932 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 DNAJC6O75061 913 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 GPR89BP0CG08 455 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 DGKAP23743 735 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 PMLP29590 882 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 FOXN2P32314 431 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 LIMK1P53667 647 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 TUBB4BP68371 445 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 CBLBQ13191 982 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 THOC5Q13769 683 aaKnown RBP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 HLTFQ14527 1009 aaKnown RBP eCLIP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 ELOCQ15369 112 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 LONRF1Q17RB8 773 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 KHDC1Q4VXA5 237 aaKnown RBP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 PYCR3Q53H96 274 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 AARS2Q5JTZ9 985 aaKnown RBP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 SPANXN3Q5MJ09 141 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 TEX35Q5T0J7 233 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 MRNIPQ6NTE8 343 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 PSAPL1Q6NUJ1 521 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 MICALCLQ6ZW33 695 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 CCDC25Q86WR0 208 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 GATAD2AQ86YP4 633 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 ANKMY2Q8IV38 441 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 IGDCC3Q8IVU1 814 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 PIANPQ8IYJ0 282 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 ZBED8Q8IZ13 594 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 FSTL5Q8N475 847 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 OTUD6BQ8N6M0 293 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 LRRN4CLQ8ND94 238 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 NETO1Q8TDF5 533 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 SAP25Q8TEE9 199 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 PYROXD1Q8WU10 500 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 CFAP36Q96G28 342 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 FAM129AQ9BZQ8 928 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 TMEM168Q9H0V1 697 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 SAYSD1Q9NPB0 183 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 C20orf96Q9NUD7 363 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 TRNAU1APQ9NX07 287 aaKnown RBP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 MTRF1LQ9UGC7 380 aaKnown RBP12.93□□□□□ -0.34
DNMT1-205ENST00000585920 DOLKQ9UPQ8 538 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 PRKAB1Q9Y478 270 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 TEX264Q9Y6I9 313 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 FAM169AQ9Y6X4 670 aa12.93□□□□□ -0.34
DNMT1-205ENST00000585920 ZCWPW2A0A1B0GU75 182 aa12.92□□□□□ -0.34
DNMT1-205ENST00000585920 GOLGA8KD6RF30 607 aa12.92□□□□□ -0.34
DNMT1-205ENST00000585920 GOLGA8TH3BQL2 631 aa12.92□□□□□ -0.34
DNMT1-205ENST00000585920 PFDN6O15212 129 aa12.92□□□□□ -0.34
DNMT1-205ENST00000585920 AQP9O43315 295 aa12.92□□□□□ -0.34
DNMT1-205ENST00000585920 SLU7O95391 586 aaKnown RBP12.92□□□□□ -0.34
DNMT1-205ENST00000585920 ACRV1P26436 265 aa12.92□□□□□ -0.34
DNMT1-205ENST00000585920 ARCN1P48444 511 aaKnown RBP12.92□□□□□ -0.34
DNMT1-205ENST00000585920 CUL1Q13616 776 aa12.92□□□□□ -0.34
DNMT1-205ENST00000585920 ITIH4Q14624 930 aa12.92□□□□□ -0.34
DNMT1-205ENST00000585920 CRYMQ14894 314 aa12.92□□□□□ -0.34
DNMT1-205ENST00000585920 DBN1Q16643 649 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms