RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CES3Q6UWW8 571 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 CEP68Q76N32 757 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 LPCAT2Q7L5N7 544 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 C11orf74Q86VG3 221 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 NLRP8Q86W28 1048 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 OTUD6BQ8N6M0 293 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 RDH11Q8TC12 318 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 CXorf40AQ8TE69 158 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 FUBP1Q96AE4 644 aaKnown RBP12.53□□□□□ -0.4
VMP1-202ENST00000585847 DTD2Q96FN9 168 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 ZNF778Q96MU6 729 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 SELENOSQ9BQE4 189 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 SLC17A9Q9BYT1 436 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 FZD3Q9NPG1 666 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 MBNL1Q9NR56 388 aaKnown RBP12.53□□□□□ -0.4
VMP1-202ENST00000585847 TMEM74BQ9NUR3 256 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 KLHL42Q9P2K6 505 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 CA5BQ9Y2D0 317 aa12.53□□□□□ -0.4
VMP1-202ENST00000585847 GLYATL1P3A0A0U1RQE8 302 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 CCDC162PA2VCL2 907 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 AGAP14A8MT82 685 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 NEMP1O14524 444 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 SLC31A1O15431 190 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 BUD23O43709 281 aaKnown RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 NDUFS3O75489 264 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 RFPL1O75677 317 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 RECQL5O94762 991 aaPredicted RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 SNUPNO95149 360 aaKnown RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 SOD1P00441 154 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 GOT2P00505 430 aaKnown RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 WNT1P04628 370 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 ELFN1P0C7U0 828 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 ZNF7P17097 686 aaPredicted RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 RPS3P23396 243 aaKnown RBP eCLIP12.52□□□□□ -0.41
VMP1-202ENST00000585847 IGFALSP35858 605 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 ETV3P41162 512 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 SKIV2L2P42285 1042 aaKnown RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 SPINT3P49223 89 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 DHPSP49366 369 aaPredicted RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 RAB10P61026 200 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 MROH9Q5TGP6 573 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 LRRC8EQ6NSJ5 796 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 UGT3A1Q6NUS8 523 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 GCNT7Q6ZNI0 430 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 RGS9BPQ6ZS82 235 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 SH2D5Q6ZV89 423 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 Q6ZVL8 140 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 HOMEZQ8IX15 550 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 RBFAQ8N0V3 343 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 CYP4X1Q8N118 509 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 TMEM145Q8NBT3 493 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 DYDC1Q8WWB3 177 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 KCNJ9Q92806 393 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 FOXJ1Q92949 421 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 BMFQ96LC9 184 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 TBATAQ96M53 351 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 LENG8Q96PV6 779 aaPredicted RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 AGAP2Q99490 1192 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 TRIM56Q9BRZ2 755 aaKnown RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 ZSCAN5AQ9BUG6 496 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 TSSK1BQ9BXA7 367 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 ABCG8Q9H221 673 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 VPS11Q9H270 941 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 KCNK9Q9NPC2 374 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 SLC2A6Q9UGQ3 507 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 EIF2B4Q9UI10 523 aaKnown RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 PILRBQ9UKJ0 227 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 RALGAPA1Q6GYQ0 2036 aa12.52□□□□□ -0.41
VMP1-202ENST00000585847 KMT2BQ9UMN6 2715 aaPredicted RBP12.52□□□□□ -0.41
VMP1-202ENST00000585847 ACACBO00763 2458 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 ADAMTS9Q9P2N4 1935 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 PCDH15Q96QU1 1955 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 TRBV5-4A0A0C4DH59 114 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 FAM95CA0A1B0GW59 222 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 A0A1W2PR77 199 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 CFAP99D6REC4 459 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 EIF3FO00303 357 aaPredicted RBP12.51□□□□□ -0.41
VMP1-202ENST00000585847 GAPDHSO14556 408 aaPredicted RBP12.51□□□□□ -0.41
VMP1-202ENST00000585847 BIRC5O15392 142 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 RHOBTB1O94844 696 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 EPN2O95208 641 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 PRAMEF1O95521 474 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 AHSGP02765 367 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 ALDOAP04075 364 aaKnown RBP12.51□□□□□ -0.41
VMP1-202ENST00000585847 GSTM1P09488 218 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 BPIP17213 487 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 CD27P26842 260 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 MC4RP32245 332 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 FOXN2P32314 431 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 CA5AP35218 305 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 CSRP3P50461 194 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 ARSDP51689 593 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 PRKAA2P54646 552 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 GSTM4Q03013 218 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 ASPHQ12797 758 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 NFATC2Q13469 925 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 USP10Q14694 798 aaKnown RBP12.51□□□□□ -0.41
VMP1-202ENST00000585847 LYSMD4Q5XG99 296 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 KLC3Q6P597 504 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 KIRREL3Q8IZU9 778 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms