RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 OFCC1Q8IZS5 231 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ENDOVQ8N8Q3 282 aaKnown RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 GPR156Q8NFN8 814 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 SCAMP4Q969E2 229 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 CLSTN3Q9BQT9 956 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 DCUN1D5Q9BTE7 237 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 WRAP53Q9BUR4 548 aaKnown RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 FAM126AQ9BYI3 521 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 MRPL40Q9NQ50 206 aaKnown RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 HCFC1R1Q9NWW0 138 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ESRRBO95718 433 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 CD1DP15813 335 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 CTNNB1P35222 781 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 MAGEA11P43364 429 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 PABPC1LQ4VXU2 614 aaKnown RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 PARP8Q8N3A8 854 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 PXYLP1Q8TE99 480 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 MYOCQ99972 504 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 FEM1AQ9BSK4 669 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 IGFLR1Q9H665 355 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 COQ10BQ9H8M1 238 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 SLC25A13Q9UJS0 675 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ZNF711Q9Y462 761 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 FAM155AB1AL88 458 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ULK1O75385 1050 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 SBK3P0C264 359 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ATXN1LP0C7T5 689 aaKnown RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 BMP1P13497 986 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 CCL5P13501 91 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 HTR7P34969 479 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 VEGFBP49765 207 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 MTTPP55157 894 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ACOX1Q15067 660 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 TAF1AQ15573 450 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 WFDC5Q8TCV5 224 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ELMO1Q92556 727 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 SH3KBP1Q96B97 665 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 C1QTNF1Q9BXJ1 281 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 SOX17Q9H6I2 414 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 CACNA2D2Q9NY47 1150 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 TRAV19A0A0A6YYK7 116 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 NOL3O60936 208 aaKnown RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 SLC22A3O75751 556 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 UQCRBP14927 111 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 NTHL1P78549 312 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 TUBB3Q13509 450 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 TRIM25Q14258 630 aaKnown RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 IHHQ14623 411 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 LIMS2Q7Z4I7 341 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 CLEC14AQ86T13 490 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 SYTL1Q8IYJ3 562 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 BEND7Q8N7W2 519 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 KLHL32Q96NJ5 620 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 COPS8Q99627 209 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 CCDC28BQ9BUN5 200 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 PRPF19Q9UMS4 504 aaKnown RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 RPL26L1Q9UNX3 145 aaKnown RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 WNT6Q9Y6F9 365 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 ILVBLA1L0T0 632 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 PRORSD1PA6NEY8 169 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 ATP5BP06576 529 aaKnown RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 HOXD9P28356 352 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 CTSOP43234 321 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 HTR6P50406 440 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 TLDC1Q6P9B6 456 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 SLC2A7Q6PXP3 512 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 RFLNAQ6ZTI6 216 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 SATL1Q86VE3 508 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 ABTB1Q969K4 478 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 NSMCE2Q96MF7 247 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 TCF25Q9BQ70 676 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 TDRD1Q9BXT4 1180 aaKnown RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 RUBCNLQ9H714 662 aa11.18□□□□□ -0.62
TOP3A-217ENST00000584582 EIF3LQ9Y262 564 aaKnown RBP11.18□□□□□ -0.62
TOP3A-217ENST00000584582 A0A1B0GTL3 188 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 DHRS12A0PJE2 317 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 UBFD1O14562 309 aaKnown RBP11.17□□□□□ -0.62
TOP3A-217ENST00000584582 LZTS3O60299 673 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-217ENST00000584582 WDR47O94967 919 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 OR6B1O95007 311 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 FASP25445 335 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 AQP1P29972 269 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 HNF4AP41235 474 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 APLP1P51693 650 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 ESRRGP62508 458 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 GK3PQ14409 553 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 TRAPPC5Q8IUR0 188 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 MIPOL1Q8TD10 442 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 PRICKLE1Q96MT3 831 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-217ENST00000584582 SH3BP4Q9P0V3 963 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 INSL5Q9Y5Q6 135 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 GNG14A0A1W2PPG7 69 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 SYNDIG1LA6NDD5 238 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 KDELR3O43731 214 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 RNASEH2AO75792 299 aaKnown RBP11.17□□□□□ -0.62
TOP3A-217ENST00000584582 MMP2P08253 660 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 CDH15P55291 814 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 ATP6V0D1P61421 351 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 SNRPD1P62314 119 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms