RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 NFATC2Q13469 925 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 CLPPQ16740 277 aaPredicted RBP20.14■□□□□ 0.81
SS18-224ENST00000584083 LDLRAP1Q5SW96 308 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 MEI1Q5TIA1 1274 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 SLC9B2Q86UD5 537 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 SLC13A5Q86YT5 568 aaPredicted RBP20.14■□□□□ 0.81
SS18-224ENST00000584083 TAB3Q8N5C8 712 aaPredicted RBP20.14■□□□□ 0.81
SS18-224ENST00000584083 ZNF398Q8TD17 642 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 AHCYL2Q96HN2 611 aaKnown RBP20.14■□□□□ 0.81
SS18-224ENST00000584083 NUDT22Q9BRQ3 303 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 ZCCHC2Q9C0B9 1178 aaKnown RBP20.14■□□□□ 0.81
SS18-224ENST00000584083 FEZ2Q9UHY8 353 aaPredicted RBP20.14■□□□□ 0.81
SS18-224ENST00000584083 KCTD3Q9Y597 815 aa20.14■□□□□ 0.81
SS18-224ENST00000584083 FAM208BQ5VWN6 2430 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 IGHV1OR21-1A0A087WYE8 117 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 KIR2DS5A0A0G2JLQ3 304 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 A0A0G2JNG1 304 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 A6NCN8 305 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 OR5K4A6NMS3 321 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 KIR2DS3K7RE56 304 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 HGFP14210 728 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 MLLT3P42568 568 aaPredicted RBP20.13■□□□□ 0.81
SS18-224ENST00000584083 GDF10P55107 478 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 CCZ1BP86790 482 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 CCZ1P86791 482 aaPredicted RBP20.13■□□□□ 0.81
SS18-224ENST00000584083 PDE1BQ01064 536 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 KIR2DS5Q14953 304 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 P3H1Q32P28 736 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.13■□□□□ 0.81
SS18-224ENST00000584083 ZNF662Q6ZS27 426 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 JAMLQ86YT9 394 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 ZNF547Q8IVP9 402 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 SLITRK4Q8IW52 837 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 OR10G6Q8NH81 332 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 TMEM159Q96B96 161 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 SH3KBP1Q96B97 665 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 CMKLR1Q99788 373 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 TIMM29Q9BSF4 260 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 SARS2Q9NP81 518 aaKnown RBP20.13■□□□□ 0.81
SS18-224ENST00000584083 AKAP7Q9P0M2 348 aaPredicted RBP20.13■□□□□ 0.81
SS18-224ENST00000584083 PISDQ9UG56 409 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 LOXL2Q9Y4K0 774 aa20.13■□□□□ 0.81
SS18-224ENST00000584083 PDZK1P1A8MUH7 402 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 CDRT15L2A8MXV6 281 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 GAPDHSO14556 408 aaPredicted RBP20.12■□□□□ 0.81
SS18-224ENST00000584083 PSMD3O43242 534 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 LIASO43766 372 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 PRAMEF1O95521 474 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 ITGA2BP08514 1039 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 HOXB3P14651 431 aaPredicted RBP20.12■□□□□ 0.81
SS18-224ENST00000584083 VCLP18206 1134 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 AKT1P31749 480 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 GPLD1P80108 840 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 GPRC6AQ5T6X5 926 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 DENND5AQ6IQ26 1287 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 SPACA3Q8IXA5 215 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 KLHDC8BQ8IXV7 354 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 RASGEF1AQ8N9B8 481 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 DDHD1Q8NEL9 900 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 KCNE4Q8WWG9 221 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 FRMD8P1Q9BZ68 369 aaPredicted RBP20.12■□□□□ 0.81
SS18-224ENST00000584083 LRRC40Q9H9A6 602 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 ARNT2Q9HBZ2 717 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 CPNE7Q9UBL6 633 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 FKBPLQ9UIM3 349 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 ZNF148Q9UQR1 794 aa20.12■□□□□ 0.81
SS18-224ENST00000584083 STIP1P31948 543 aaKnown RBP20.11■□□□□ 0.81
SS18-224ENST00000584083 CA5AP35218 305 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 TMPRSS15P98073 1019 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 SNX1Q13596 522 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 SEPT7Q16181 437 aaKnown RBP20.11■□□□□ 0.81
SS18-224ENST00000584083 KCTD11Q693B1 232 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 ZNF574Q6ZN55 896 aaPredicted RBP20.11■□□□□ 0.81
SS18-224ENST00000584083 PDZD3Q86UT5 571 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 TRIM48Q8IWZ4 208 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 AVL9Q8NBF6 648 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 C1orf54Q8WWF1 131 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 CRELD1Q96HD1 420 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 DPYSL5Q9BPU6 564 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 ASB8Q9H765 288 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 SMOXQ9NWM0 555 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 CELSR3Q9NYQ7 3312 aa20.11■□□□□ 0.81
SS18-224ENST00000584083 IGHV5-10-1A0A0J9YXX1 117 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 DUX1O43812 170 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 SRP72O76094 671 aaKnown RBP20.1■□□□□ 0.81
SS18-224ENST00000584083 IFNB1P01574 187 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 TPH1P17752 444 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 ITIH1P19827 911 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 MSH3P20585 1137 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 IDSP22304 550 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 RPL10P27635 214 aaKnown RBP20.1■□□□□ 0.81
SS18-224ENST00000584083 CSF2RBP32927 897 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 MAPK9P45984 424 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 LIMK2P53671 638 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 MSLNQ13421 630 aaPredicted RBP20.1■□□□□ 0.81
SS18-224ENST00000584083 SQSTM1Q13501 440 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 C16orf72Q14CZ0 275 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 TMEM220Q6QAJ8 160 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 CLEC14AQ86T13 490 aa20.1■□□□□ 0.81
SS18-224ENST00000584083 RCBTB1Q8NDN9 531 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms