RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 CDYLQ9Y232 598 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MYO7AQ13402 2215 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SLC35E2BP0CK96 405 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SELPP16109 830 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 YWHAQP27348 245 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PCSK1P29120 753 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CYP2C18P33260 490 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PPARGP37231 505 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 YWHAHQ04917 246 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ADGRE1Q14246 886 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 NR1D2Q14995 579 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SLC39A12Q504Y0 691 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PIGGQ5H8A4 983 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SPANXN3Q5MJ09 141 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 KCTD11Q693B1 232 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RAB12Q6IQ22 244 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 VASH1Q7L8A9 365 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MRPL10Q7Z7H8 261 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 APLFQ8IW19 511 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CENPLQ8N0S6 344 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RYBPQ8N488 228 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SH3RF2Q8TEC5 729 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LINC01599Q8WXQ3 324 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 WDCPQ9H6R7 721 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 NOL11Q9H8H0 719 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RPRD1BQ9NQG5 326 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TBC1D13Q9NVG8 400 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 HPF1Q9NWY4 346 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 HSFX1Q9UBD0 423 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RIMS3Q9UJD0 308 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PCDHB7Q9Y5E2 793 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PCDHB3Q9Y5E6 796 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 V9GYQ6 96 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SNTNA6NMZ2 147 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GJB3O75712 270 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MT-ND1P03886 318 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 POLR2EP19388 210 aaKnown RBP11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GSK3AP49840 483 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LIPEQ05469 1076 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 C19orf57Q0VDD7 668 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PLD1Q13393 1074 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 AGKQ53H12 422 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CLVS2Q5SYC1 327 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PLEKHM3Q6ZWE6 761 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ADGRG6Q86SQ4 1221 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TMEM135Q86UB9 458 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TMEM151AQ8N4L1 468 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PDCD6IPQ8WUM4 868 aaKnown RBP11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 HAPLN3Q96S86 360 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SECISBP2Q96T21 854 aaKnown RBP11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MRM3Q9HC36 420 aaKnown RBP11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 COMMD3-BMI1R4GMX3 469 aa11.52□□□□□ -0.56
CDK5RAP3-231ENST00000584063 C5orf42Q9H799 3197 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SAC3D1A6NKF1 404 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SOAT2O75908 522 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ASLP04424 464 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ME2P23368 584 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TRIM23P36406 574 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 CDH13P55290 713 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 C4orf22Q6V702 233 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ZC3HC1Q86WB0 502 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 THEM5Q8N1Q8 247 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ZSCAN1Q8NBB4 408 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TXNDC5Q8NBS9 432 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 APBB2Q92870 758 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 DGCR14Q96DF8 476 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 POMKQ9H5K3 350 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 FANCEQ9HB96 536 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 EIF2B3Q9NR50 452 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 RGS18Q9NS28 235 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 RAP2CQ9Y3L5 183 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 RALGAPA2Q2PPJ7 1873 aa11.52□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TCAF2A6NFQ2 919 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 ZNF839A8K0R7 811 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 PPP6CO00743 305 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 BRINP1O60477 761 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 CHRNB1P11230 501 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 CYP2A6P11509 494 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 RPL5P46777 297 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 CARD18P57730 90 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 C1QTNF8P60827 252 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 VBP1P61758 197 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 GRM2Q14416 872 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 DDR2Q16832 855 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TSTD2Q5T7W7 516 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 INTS11Q5TA45 600 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 FAM171A1Q5VUB5 890 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 LIPMQ5VYY2 423 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 KLC3Q6P597 504 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TMEM86AQ8N2M4 240 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 DQX1Q8TE96 717 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SERPINI1Q99574 410 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 DCUN1D5Q9BTE7 237 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 FICDQ9BVA6 458 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 NEUROD4Q9HD90 331 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 EGFL7Q9UHF1 273 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 TDRKHQ9Y2W6 561 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 RWDD3Q9Y3V2 267 aa11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 FAM32AQ9Y421 112 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-231ENST00000584063 SLC9B1P1A6NJY1 282 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms