RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 STARD8Q92502 1023 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 IMP4Q96G21 291 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 SLC45A3Q96JT2 553 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 TTC25Q96NG3 672 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 OLFM3Q96PB7 478 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 PLEKHG4BQ96PX9 1271 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 TIMM29Q9BSF4 260 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 ZCCHC2Q9C0B9 1178 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 SLC25A51Q9H1U9 297 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 TRIT1Q9H3H1 467 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 MAGEE1Q9HCI5 957 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 TRIM39Q9HCM9 518 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 APMAPQ9HDC9 416 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 PRDM8Q9NQV8 689 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 FBXO8Q9NRD0 319 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 DDX56Q9NY93 547 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 PDP2Q9P2J9 529 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 TUBD1Q9UJT1 453 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 CNOT6Q9ULM6 557 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 DNAJC16Q9Y2G8 782 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 UNC13CQ8NB66 2214 aa8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 FASNP49327 2511 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-229ENST00000583697 SOWAHDA6NJG2 315 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TERTO14746 1132 aaKnown RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SUV39H1O43463 412 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 VEGFDO43915 354 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 MTX2O75431 263 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PMPCBO75439 489 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 UBXN7O94888 489 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 NDST3O95803 873 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 MT-CYBP00156 380 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TYRP1P17643 537 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 FECHP22830 423 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ARHGAP25P42331 645 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SLC1A1P43005 524 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CAPZBP47756 277 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CLCNKAP51800 687 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 GFERP55789 205 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 UBE2IP63279 158 aaKnown RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SEPT6Q14141 434 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ASTE1Q2TB18 679 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ZNF648Q5T619 568 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 NPNTQ6UXI9 565 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 BZW1Q7L1Q6 419 aaKnown RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ADGRG6Q86SQ4 1221 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 RASGRP3Q8IV61 690 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 C9orf43Q8TAL5 461 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SLC35G2Q8TBE7 412 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 RNF25Q96BH1 459 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CXorf40BQ96DE9 158 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 STAMBPL1Q96FJ0 436 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 C9orf72Q96LT7 481 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TGM7Q96PF1 710 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 VPS35Q96QK1 796 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TRIB3Q96RU7 358 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ULBP3Q9BZM4 244 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 BRD8Q9H0E9 1235 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 UCK1Q9HA47 277 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SPTLC3Q9NUV7 552 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SIDT1Q9NXL6 827 aaKnown RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 KLHL8Q9P2G9 620 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 IL17BQ9UHF5 180 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TMEM184BQ9Y519 407 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PCDHA13Q9Y5I0 950 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ADGRG1Q9Y653 693 aa8.58□□□□□ -1.04
CDK5RAP3-229ENST00000583697 LOC101059948A0A1B0GTJ6 334 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CHUKO15111 745 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TOX3O15405 576 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CDK14O94921 469 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 DLGAP3O95886 979 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 C9P02748 559 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ZNF7P17097 686 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 BPIP17213 487 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 XRCC1P18887 633 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TCN2P20062 427 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 IDSP22304 550 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 RPL10P27635 214 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SPAM1P38567 509 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 STAT5AP42229 794 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SEPHS1P49903 392 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 DRG2P55039 364 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TLE1Q04724 770 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TFDP2Q14188 446 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 MAP7Q14244 749 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PLCL1Q15111 1095 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PPP2R5EQ16537 467 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 LRRC38Q5VT99 294 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ZDHHC20Q5W0Z9 365 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 C16orf46Q6P387 395 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 RAD9BQ6WBX8 426 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TMEM26Q6ZUK4 368 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 GLT6D1Q7Z4J2 308 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TMC3Q7Z5M5 1100 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 KIAA1328Q86T90 577 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PTRH1Q86Y79 214 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TMEM139Q8IV31 216 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 RBM12BQ8IXT5 1001 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 UNC5BQ8IZJ1 945 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SPATA22Q8NHS9 363 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TFB1MQ8WVM0 346 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms