RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 CYSRT1A8MQ03 144 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 H3BRJ5 948 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 KRT14P02533 472 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 FUCA1P04066 466 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 FGF3P11487 239 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 CR2P20023 1033 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 LHCGRP22888 699 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 CSTF2P33240 577 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 HSD17B3P37058 310 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ADCY8P40145 1251 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ARL4AP40617 200 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ACTR1BP42025 376 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 GPR1P46091 355 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 PPM1FP49593 454 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ACTR1AP61163 376 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 TRAF2Q12933 501 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 TFDP2Q14188 446 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 CLCA4Q14CN2 919 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 PPP1R7Q15435 360 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 DPYSL2Q16555 572 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ANKRD20A8PQ5CZ79 823 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 RALGPS1Q5JS13 557 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SLC9A4Q6AI14 798 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 BORAQ6PGQ7 559 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 DOK6Q6PKX4 331 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 Q6ZVL8 140 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 USP45Q70EL2 814 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 RFX6Q8HWS3 928 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 TP53INP2Q8IXH6 220 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 NAGSQ8N159 534 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 NDUFAF2Q8N183 169 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 CBARPQ8N350 705 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 OR4D9Q8NGE8 314 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ACTL9Q8TC94 416 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 FBXO25Q8TCJ0 367 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 PATE1Q8WXA2 126 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SCRN2Q96FV2 425 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 OR2M4Q96R27 311 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SH3GL2Q99962 352 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 MGME1Q9BQP7 344 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 DDA1Q9BW61 102 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SLC12A9Q9BXP2 914 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 MAK16Q9BXY0 300 aaKnown RBP9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 NOD2Q9HC29 1040 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SLC39A1Q9NY26 324 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 KCNK4Q9NYG8 393 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SAE1Q9UBE0 346 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SLC17A4Q9Y2C5 497 aa9.64□□□□□ -0.87
CDK5RAP3-227ENST00000583352 FLNBO75369 2602 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SDK2Q58EX2 2172 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 IGHV1OR21-1A0A087WYE8 117 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 NPIPB15A6NHN6 443 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 APOC4-APOC2K7ER74 178 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 PPM1DO15297 605 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 PGLSO95336 258 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 GAS8O95995 478 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 APOC2P02655 101 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ZSCAN5DPP0CG00 497 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 THRAP10827 490 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ETS1P14921 441 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 PECAM1P16284 738 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 AMPD1P23109 780 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 UGT1A3P35503 534 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 MMP13P45452 471 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 POLD2P49005 469 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 GPLD1P80108 840 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 OTUD4Q01804 1114 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 CAV1Q03135 178 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 DPTQ07507 201 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 DHX9Q08211 1270 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SQSTM1Q13501 440 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 KRT81Q14533 505 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 TRIP13Q15645 432 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 DCAF12Q5T6F0 453 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ARMC12Q5T9G4 340 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 NKAIN2Q5VXU1 208 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 TMEM71Q6P5X7 295 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 LRIG3Q6UXM1 1119 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 TMC3Q7Z5M5 1100 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 PRUNE1Q86TP1 453 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 CACNA2D3Q8IZS8 1091 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 PGBD5Q8N414 524 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ATPAF2Q8N5M1 289 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 CCDC89Q8N998 374 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 GLIS1Q8NBF1 620 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 PTCD2Q8WV60 388 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 PMEPA1Q969W9 287 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 AP2M1Q96CW1 435 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SCARF2Q96GP6 870 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 SNF8Q96H20 258 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 AHCYL2Q96HN2 611 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ZIM3Q96PE6 472 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 MCCC1Q96RQ3 725 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 FMO2Q99518 471 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ZNF670Q9BS34 389 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ASPSCR1Q9BZE9 553 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 EPB41L4BQ9H329 900 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 ACBD3Q9H3P7 528 aa9.63□□□□□ -0.87
CDK5RAP3-227ENST00000583352 MED4Q9NPJ6 270 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms