RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CPNE9Q8IYJ1 553 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 PELI3Q8N2H9 469 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 ANKRD27Q96NW4 1050 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 ZDHHC6Q9H6R6 413 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 SARS2Q9NP81 518 aaKnown RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 GDE1Q9NZC3 331 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 CLEC1BQ9P126 229 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 STOML1Q9UBI4 398 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 G3BP2Q9UN86 482 aaKnown RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 SLC8A2Q9UPR5 921 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 COPG1Q9Y678 874 aaKnown RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 A0A088AWK7 358 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 A0A0U1RQS6 177 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 UBFD1O14562 309 aaKnown RBP22.42■■□□□ 1.18
CCDC47-204ENST00000582252 AZIN1O14977 448 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 UBDO15205 165 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 BNIP3LO60238 219 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 PSMG1O95456 288 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 TSPAN12O95859 305 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 NNMTP40261 264 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 CLCQ05315 142 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 ADGRE1Q14246 886 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 ATAT1Q5SQI0 421 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 C1orf146Q5VVC0 180 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 ADAMTSL2Q86TH1 951 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 CELF5Q8N6W0 485 aaKnown RBP22.42■■□□□ 1.18
CCDC47-204ENST00000582252 KIAA1958Q8N8K9 716 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 RIN3Q8TB24 985 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 EEF1AKMT1Q8WVE0 214 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 SLC30A3Q99726 388 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 MID1IP1Q9NPA3 183 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 IL26Q9NPH9 171 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 CLDND1Q9NY35 253 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 NUDT4Q9NZJ9 180 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 SLC7A8Q9UHI5 535 aa22.42■■□□□ 1.18
CCDC47-204ENST00000582252 PRPF19Q9UMS4 504 aaKnown RBP22.42■■□□□ 1.18
CCDC47-204ENST00000582252 GAPDHSO14556 408 aaPredicted RBP22.41■■□□□ 1.18
CCDC47-204ENST00000582252 CCNT2O60583 730 aaKnown RBP22.41■■□□□ 1.18
CCDC47-204ENST00000582252 TBX10O75333 385 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 CDK14O94921 469 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 SIX3O95343 332 aaPredicted RBP22.41■■□□□ 1.18
CCDC47-204ENST00000582252 MLYCDO95822 493 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 RPS17P08708 135 aaKnown RBP22.41■■□□□ 1.18
CCDC47-204ENST00000582252 CDC16Q13042 620 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 LY6G5CQ5SRR4 150 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 TMEM198Q66K66 360 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 ASTLQ6HA08 431 aaPredicted RBP22.41■■□□□ 1.18
CCDC47-204ENST00000582252 GET4Q7L5D6 327 aaPredicted RBP22.41■■□□□ 1.18
CCDC47-204ENST00000582252 DEFB107AQ8IZN7 70 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 KYQ8NBH2 561 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 GIMAP7Q8NHV1 300 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 WDR60Q8WVS4 1066 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 FGF13Q92913 245 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 C19orf60Q96EN9 201 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 MCCC1Q96RQ3 725 aaPredicted RBP22.41■■□□□ 1.18
CCDC47-204ENST00000582252 SERPINI1Q99574 410 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 PFDN4Q9NQP4 134 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 GALPQ9UBC7 116 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 NKX1-2Q9UD57 310 aaPredicted RBP22.41■■□□□ 1.18
CCDC47-204ENST00000582252 C5orf42Q9H799 3197 aa22.41■■□□□ 1.18
CCDC47-204ENST00000582252 WASH3PC4AMC7 463 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 H0Y3Z8 333 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 GIPC1O14908 333 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 S100BP04271 92 aaPredicted RBP22.4■■□□□ 1.18
CCDC47-204ENST00000582252 IGFBP4P22692 258 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 ATP4BP51164 291 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 CCNG1P51959 295 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 CDH13P55290 713 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 ACTR3P61158 418 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 IRX1P78414 480 aaPredicted RBP22.4■■□□□ 1.18
CCDC47-204ENST00000582252 COL19A1Q14993 1142 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 CRY1Q16526 586 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 CRTC1Q6UUV9 634 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 DPY19L3Q6ZPD9 716 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 FRA10AC1Q70Z53 315 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 KIAA0907Q7Z7F0 614 aaPredicted RBP22.4■■□□□ 1.18
CCDC47-204ENST00000582252 ZSWIM9Q86XI8 627 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 ULK4Q96C45 1275 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 GAS2L1Q99501 681 aaPredicted RBP22.4■■□□□ 1.18
CCDC47-204ENST00000582252 CD274Q9NZQ7 290 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 NPIPB15A6NHN6 443 aaPredicted RBP22.4■■□□□ 1.18
CCDC47-204ENST00000582252 VPS4BO75351 444 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 CRCPO75575 148 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 NUDT2P50583 147 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 SH3BP2P78314 561 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 TBL3Q12788 808 aaKnown RBP22.4■■□□□ 1.18
CCDC47-204ENST00000582252 CHRNA6Q15825 494 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 KANK2Q63ZY3 851 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 CLEC6AQ6EIG7 209 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 RIPOR1Q6ZS17 1223 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 MYO1HQ8N1T3 1032 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 CLPTM1LQ96KA5 538 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 RIPOR3Q96MK2 946 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 S1PR5Q9H228 398 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 EFCAB1Q9HAE3 211 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 TNFRSF12AQ9NP84 129 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 CDH22Q9UJ99 828 aa22.4■■□□□ 1.18
CCDC47-204ENST00000582252 FKBP6O75344 327 aa22.39■■□□□ 1.17
CCDC47-204ENST00000582252 CYP2A6P11509 494 aaPredicted RBP22.39■■□□□ 1.17
CCDC47-204ENST00000582252 TSPAN8P19075 237 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms