RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 RIMKLBQ9ULI2 386 aa13.17□□□□□ -0.3
SNX11-210ENST00000582104 NCKAP1Q9Y2A7 1128 aa13.17□□□□□ -0.3
SNX11-210ENST00000582104 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.17□□□□□ -0.3
SNX11-210ENST00000582104 HEMK1Q9Y5R4 338 aaPredicted RBP13.17□□□□□ -0.3
SNX11-210ENST00000582104 FAM169AQ9Y6X4 670 aa13.17□□□□□ -0.3
SNX11-210ENST00000582104 TLN1Q9Y490 2541 aaKnown RBP13.16□□□□□ -0.3
SNX11-210ENST00000582104 RELNP78509 3460 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 A0A1B0GTQ1 180 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 A0A1W2PQU0 124 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 TCRBV9S1A1TA0A576 114 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 FAM47DPA6NHR8 397 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 GOLGA8KD6RF30 607 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 GOLGA8TH3BQL2 631 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 GPR39O43194 453 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 TSPAN6O43657 245 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 RECQL5O94762 991 aaPredicted RBP13.16□□□□□ -0.3
SNX11-210ENST00000582104 VAPBO95292 243 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 POLBP06746 335 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 GP1BBP13224 206 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 HSD17B3P37058 310 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 VAC14Q08AM6 782 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 PEX6Q13608 980 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 EFTUD2Q15029 972 aaKnown RBP eCLIP13.16□□□□□ -0.36e-7■■■■■ 47.1
SNX11-210ENST00000582104 ACOX1Q15067 660 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 TMEM259Q4ZIN3 620 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 SPANXN3Q5MJ09 141 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 ARMC3Q5W041 872 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 KIAA0930Q6ICG6 404 aaPredicted RBP13.16□□□□□ -0.3
SNX11-210ENST00000582104 KDM7AQ6ZMT4 941 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 CEP128Q6ZU80 1094 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 C3orf62Q6ZUJ4 267 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 TRMT10CQ7L0Y3 403 aaKnown RBP13.16□□□□□ -0.3
SNX11-210ENST00000582104 NLRP9Q7RTR0 991 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 CCNJLQ8IV13 435 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 MREGQ8N565 214 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNX11-210ENST00000582104 CXorf40AQ8TE69 158 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 SCAMP4Q969E2 229 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 DTD2Q96FN9 168 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 AGAP2Q99490 1192 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 NAT9Q9BTE0 207 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 BTBD1Q9H0C5 482 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 ABCG8Q9H221 673 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 VPS37BQ9H9H4 285 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 IL26Q9NPH9 171 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 MOCS1Q9NZB8 636 aa13.16□□□□□ -0.3
SNX11-210ENST00000582104 MARCH4Q9P2E8 410 aaPredicted RBP13.16□□□□□ -0.3
SNX11-210ENST00000582104 USP9YO00507 2555 aaPredicted RBP13.16□□□□□ -0.3
SNX11-210ENST00000582104 TBC1D3DA0A087WVF3 549 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 TBC1D3IA0A087WXS9 549 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 TBC1D3EA0A087X179 549 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 TBC1D3KA0A087X1G2 549 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 TBC1D3FA6NER0 549 aaPredicted RBP13.15□□□□□ -0.3
SNX11-210ENST00000582104 CXorf49A8MYA2 514 aaPredicted RBP13.15□□□□□ -0.3
SNX11-210ENST00000582104 TBC1D3LB9A6J9 549 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 PSMD11O00231 422 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 RAD51BO15315 384 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 ERLIN1O75477 346 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 SEMA4FO95754 770 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 GOT2P00505 430 aaKnown RBP13.15□□□□□ -0.3
SNX11-210ENST00000582104 TBC1D3HP0C7X1 549 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 ERVK-10P10266 1014 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 NFKBIAP25963 317 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 MAT2AP31153 395 aaKnown RBP13.15□□□□□ -0.3
SNX11-210ENST00000582104 CDKN1CP49918 316 aaPredicted RBP13.15□□□□□ -0.3
SNX11-210ENST00000582104 CCDC15Q0P6D6 951 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 NFATC3Q12968 1075 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 SEMA3AQ14563 771 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 CHRNA6Q15825 494 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 SKIDA1Q1XH10 827 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 ZNF284Q2VY69 593 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 MAP9Q49MG5 647 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 KIAA1614Q5VZ46 1190 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 TBC1D3GQ6DHY5 549 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 TBC1D3CQ6IPX1 549 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 FAM151BQ6UXP7 276 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 ZNF574Q6ZN55 896 aaPredicted RBP13.15□□□□□ -0.3
SNX11-210ENST00000582104 HORMAD1Q86X24 394 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 TBC1D3Q8IZP1 549 aaPredicted RBP13.15□□□□□ -0.3
SNX11-210ENST00000582104 CACTIN-AS1Q8N1I8 211 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 DCBLD1Q8N8Z6 715 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 OR2T34Q8NGX1 318 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 FBF1Q8TES7 1133 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 UBLCP1Q8WVY7 318 aaPredicted RBP13.15□□□□□ -0.3
SNX11-210ENST00000582104 PEX13Q92968 403 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 ZNF578Q96N58 590 aaPredicted RBP13.15□□□□□ -0.3
SNX11-210ENST00000582104 RIOK2Q9BVS4 552 aaKnown RBP13.15□□□□□ -0.3
SNX11-210ENST00000582104 C1QTNF2Q9BXJ5 285 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 FUT8Q9BYC5 575 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 FAM117AQ9C073 453 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 FAM96AQ9H5X1 160 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 SGK2Q9HBY8 427 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 PREBQ9HCU5 417 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 PKD2L2Q9NZM6 624 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 RABGEF1Q9UJ41 708 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 TMPRSS11EQ9UL52 423 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 CLCA2Q9UQC9 943 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 PKP3Q9Y446 797 aa13.15□□□□□ -0.3
SNX11-210ENST00000582104 ARID1BQ8NFD5 2236 aaPredicted RBP13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms