RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	DDHD1	Q8NEL9	900 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	BLOC1S5	Q8TDH9	187 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SNRNP27	Q8WVK2	155 aa	Known RBP	12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PATE1	Q8WXA2	126 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KCNK6	Q9Y257	313 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	IGHV5-10-1	A0A0J9YXX1	117 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	AGT	P01019	485 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	IDS	P22304	550 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ITPKB	P27987	946 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PSMB4	P28070	264 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	HADHA	P40939	763 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	DMPK	Q09013	629 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	INSC	Q1MX18	579 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	AMZ1	Q400G9	498 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PHF19	Q5T6S3	580 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TMEM71	Q6P5X7	295 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	FOXR1	Q6PIV2	292 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	GPR155	Q7Z3F1	870 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	AGBL5	Q8NDL9	886 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SLC35B2	Q8TB61	432 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	HEXDC	Q8WVB3	486 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	AHCYL2	Q96HN2	611 aa	Known RBP	12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	UBL7	Q96S82	380 aa	Predicted RBP	12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	GORASP1	Q9BQQ3	440 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	NUDT22	Q9BRQ3	303 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	DESI2	Q9BSY9	194 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	FICD	Q9BVA6	458 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SEMA6C	Q9H3T2	930 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KLC4	Q9NSK0	619 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	POT1	Q9NUX5	634 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CPNE7	Q9UBL6	633 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PRKAB1	Q9Y478	270 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PCDHGA3	Q9Y5H0	932 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	AHCTF1	Q8WYP5	2266 aa		12.41	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ERI2	A8K979	691 aa	Known RBP	12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	AGAP14	A8MT82	685 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TK2	O00142	265 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CASC3	O15234	703 aa	Known RBP	12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KLK10	O43240	276 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	NRDC	O43847	1150 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	EML2	O95834	649 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	FTCD	O95954	541 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	THRA	P10827	490 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SLC5A2	P31639	672 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	UBE2I	P63279	158 aa	Known RBP	12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CHRNA6	Q15825	494 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	LONRF2	Q1L5Z9	754 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ZNF574	Q6ZN55	896 aa	Predicted RBP	12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ARHGEF18	Q6ZSZ5	1173 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	USP53	Q70EK8	1073 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TMPRSS9	Q7Z410	1059 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ZNF547	Q8IVP9	402 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	GDAP1	Q8TB36	358 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CCDC110	Q8TBZ0	833 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ZNF398	Q8TD17	642 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ULK4	Q96C45	1275 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	RTP4	Q96DX8	246 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	FCRL3	Q96P31	734 aa	Predicted RBP	12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TBL1Y	Q9BQ87	522 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ASPSCR1	Q9BZE9	553 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	LRRC40	Q9H9A6	602 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	RDH14	Q9HBH5	336 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	BPIFA1	Q9NP55	256 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TRIM10	Q9UDY6	481 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PISD	Q9UG56	409 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TMPRSS11E	Q9UL52	423 aa		12.4	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ATRX	P46100	2492 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708		B4E171	279 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	GAPDHS	O14556	408 aa	Predicted RBP	12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	TOX3	O15405	576 aa	Predicted RBP	12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	KALRN	O60229	2985 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	SNX2	O60749	519 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	SRP72	O76094	671 aa	Known RBP	12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CCDC175	P0C221	793 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	RALB	P11234	206 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CSTF2	P33240	577 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	TSPAN7	P41732	249 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	HAL	P42357	657 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	RAB15	P59190	212 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	MSLN	Q13421	630 aa	Predicted RBP	12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	LAMB3	Q13751	1172 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	C16orf72	Q14CZ0	275 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	GPR33	Q49SQ1	333 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	FAM182A	Q5T1J6	154 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	GPRC6A	Q5T6X5	926 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	SEL1L2	Q5TEA6	688 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	KCTD11	Q693B1	232 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	DENND5A	Q6IQ26	1287 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	AADACL2	Q6P093	401 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	CRTC3	Q6UUV7	619 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	FAM151B	Q6UXP7	276 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	C11orf96	Q7Z7L8	435 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	LINC00523	Q86TU6	105 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	AMZ2	Q86W34	360 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	JAML	Q86YT9	394 aa		12.39	□□□□□ -0.43
CDK5RAP3-222	ENST00000581708	PLXDC1	Q8IUK5	500 aa		12.39	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms