RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 NAP1L1P55209 391 aaKnown RBP20.64■□□□□ 0.89
CCDC42-203ENST00000581598 RAB15P59190 212 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 ADCY2Q08462 1091 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 ARHGAP22Q7Z5H3 698 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 ZNF761Q86XN6 746 aaPredicted RBP20.64■□□□□ 0.89
CCDC42-203ENST00000581598 TRIM58Q8NG06 486 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 MED8Q96G25 268 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 FCRL5Q96RD9 977 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 TIMM29Q9BSF4 260 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 ASPSCR1Q9BZE9 553 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 CPNE7Q9UBL6 633 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 SPO11Q9Y5K1 396 aa20.64■□□□□ 0.89
CCDC42-203ENST00000581598 LILRA5A6NI73 299 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 ESPNB1AK53 854 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 KMOO15229 486 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 KIF5CO60282 957 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 SNX2O60749 519 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 XRCC1P18887 633 aaPredicted RBP20.63■□□□□ 0.89
CCDC42-203ENST00000581598 NFKB1P19838 968 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 WNT3AP56704 352 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 UBE2IP63279 158 aaKnown RBP20.63■□□□□ 0.89
CCDC42-203ENST00000581598 SRSF6Q13247 344 aaKnown RBP20.63■□□□□ 0.89
CCDC42-203ENST00000581598 NFATC2Q13469 925 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 LY6DQ14210 128 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 PPP2R5EQ16537 467 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 ZNF648Q5T619 568 aaPredicted RBP20.63■□□□□ 0.89
CCDC42-203ENST00000581598 ZDHHC20Q5W0Z9 365 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 KAZNQ674X7 775 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 ZNF605Q86T29 641 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 LRRTM4Q86VH4 590 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 BMPERQ8N8U9 685 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 RBM41Q96IZ5 413 aaKnown RBP20.63■□□□□ 0.89
CCDC42-203ENST00000581598 ALS2CR12Q96Q35 445 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 SEMA4CQ9C0C4 833 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 KLC4Q9NSK0 619 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCDC42-203ENST00000581598 HACD3Q9P035 362 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCDC42-203ENST00000581598 PCDHGA4Q9Y5G9 962 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 ZNF462Q96JM2 2506 aa20.63■□□□□ 0.89
CCDC42-203ENST00000581598 AURKAO14965 403 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 ZNF7P17097 686 aaPredicted RBP20.62■□□□□ 0.89
CCDC42-203ENST00000581598 MPSTP25325 297 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 ATP1A2P50993 1020 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 BBS12Q6ZW61 710 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 SYCE1Q8N0S2 351 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 ZSCAN1Q8NBB4 408 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 HTR3CQ8WXA8 447 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 ART4Q93070 314 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 NKD1Q969G9 470 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 PMEPA1Q969W9 287 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 QKIQ96PU8 341 aaKnown RBP eCLIP20.62■□□□□ 0.89
CCDC42-203ENST00000581598 TEFMQ96QE5 360 aaKnown RBP20.62■□□□□ 0.89
CCDC42-203ENST00000581598 ZMYND15Q9H091 742 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 GOLPH3Q9H4A6 298 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 ARFGAP3Q9NP61 516 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 PRDM8Q9NQV8 689 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 WDR70Q9NW82 654 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 OCIAD1Q9NX40 245 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 SLC39A1Q9NY26 324 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 UBP1Q9NZI7 540 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 B3GALT1Q9Y5Z6 326 aa20.62■□□□□ 0.89
CCDC42-203ENST00000581598 SLC4A1P02730 911 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 PLA2G2AP14555 144 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 MC2RQ01718 297 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 MPP3Q13368 585 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 XRCC4Q13426 336 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 DCAF12Q5T6F0 453 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 ABRAXAS1Q6UWZ7 409 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 WASH2PQ6VEQ5 465 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 DAAM2Q86T65 1068 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 VASH2Q86V25 355 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 ZNF547Q8IVP9 402 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 ZNF567Q8N184 647 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 TTC30BQ8N4P2 665 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 BRSK1Q8TDC3 778 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 UBE2Q2Q8WVN8 375 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 NCSTNQ92542 709 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 MRGPRX2Q96LB1 330 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 WASH6PQ9NQA3 447 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 KLHL8Q9P2G9 620 aaPredicted RBP20.61■□□□□ 0.89
CCDC42-203ENST00000581598 SLC23A2Q9UGH3 650 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 TRHDEQ9UKU6 1024 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 TMPRSS11EQ9UL52 423 aa20.61■□□□□ 0.89
CCDC42-203ENST00000581598 MN1Q10571 1320 aaPredicted RBP20.6■□□□□ 0.89
CCDC42-203ENST00000581598 EFCAB7A8K855 629 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 APOC4-APOC2K7ER74 178 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 ZNF500O60304 480 aaPredicted RBP20.6■□□□□ 0.89
CCDC42-203ENST00000581598 KCNJ13O60928 360 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 CDK14O94921 469 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 APOC2P02655 101 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 HLA-DPA1P20036 260 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 UGT1A3P35503 534 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 TNNT3P45378 269 aaPredicted RBP20.6■□□□□ 0.89
CCDC42-203ENST00000581598 MARCKSL1P49006 195 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 COPS2P61201 443 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 LLGL1Q15334 1064 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 INSCQ1MX18 579 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 LINC00303Q3SY05 128 aa20.6■□□□□ 0.89
CCDC42-203ENST00000581598 KHDC1Q4VXA5 237 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms