RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 UGT1A5P35504 534 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 ARSDP51689 593 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 HK3P52790 923 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 LIMK1P53667 647 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 ARHGAP8P85298 464 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 CACNG1Q06432 222 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 SLC14A1Q13336 389 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 PRAMEF14Q5SWL7 426 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 KIAA0930Q6ICG6 404 aaPredicted RBP15.35■□□□□ 0.05
SS18-216ENST00000580751 MTERF4Q7Z6M4 381 aaKnown RBP15.35■□□□□ 0.05
SS18-216ENST00000580751 HID1Q8IV36 788 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 DDHD1Q8NEL9 900 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 OR2I1PQ8NGU4 316 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 OR1E3Q8WZA6 343 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 HDAC10Q969S8 669 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.35■□□□□ 0.05
SS18-216ENST00000580751 SGSM3Q96HU1 749 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 SLC13A1Q9BZW2 595 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 RMI1Q9H9A7 625 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 UGT1A7Q9HAW7 530 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 UGT1A10Q9HAW8 530 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 UGT1A8Q9HAW9 530 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 IL21RQ9HBE5 538 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 TRIM39Q9HCM9 518 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 TM7SF3Q9NS93 570 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 NSMCE4AQ9NXX6 385 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 SLC2A6Q9UGQ3 507 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 MOSPD1Q9UJG1 213 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 PCDHGB2Q9Y5G2 931 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 ZCWPW2A0A1B0GU75 182 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.34■□□□□ 0.05
SS18-216ENST00000580751 CCDC162PA2VCL2 907 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 GPR39O43194 453 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 VEGFDO43915 354 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 BANF1O75531 89 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 TNFP01375 233 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 NMBRP28336 390 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 MGAT5Q09328 741 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 SUZ12Q15022 739 aaKnown RBP15.34■□□□□ 0.05
SS18-216ENST00000580751 LONRF1Q17RB8 773 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 INAVAQ3KP66 663 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 ZNF542PQ5EBM4 170 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 ZRANB3Q5FWF4 1079 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 GPRC6AQ5T6X5 926 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 STPG1Q5TH74 334 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 ALYREFQ86V81 257 aaKnown RBP15.34■□□□□ 0.05
SS18-216ENST00000580751 NXPE1Q8N323 547 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 OR6P1Q8NGX9 317 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 CALML6Q8TD86 181 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 NETO1Q8TDF5 533 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 HEXDCQ8WVB3 486 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 TSACCQ96A04 125 aaPredicted RBP15.34■□□□□ 0.05
SS18-216ENST00000580751 MFSD3Q96ES6 412 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 CFAP36Q96G28 342 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 ZIM3Q96PE6 472 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 SUDS3Q9H7L9 328 aaPredicted RBP15.34■□□□□ 0.05
SS18-216ENST00000580751 CARS2Q9HA77 564 aaKnown RBP15.34■□□□□ 0.05
SS18-216ENST00000580751 PLAC1Q9HBJ0 212 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 CYP4F12Q9HCS2 524 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 SPASTQ9UBP0 616 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 RABGEF1Q9UJ41 708 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 TMPRSS11EQ9UL52 423 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 TMEM98Q9Y2Y6 226 aa15.34■□□□□ 0.05
SS18-216ENST00000580751 OAS3Q9Y6K5 1087 aaKnown RBP15.34■□□□□ 0.05
SS18-216ENST00000580751 LRP4O75096 1905 aa15.33■□□□□ 0.05
SS18-216ENST00000580751 TRBV5-4A0A0C4DH59 114 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 GOLGA6L10A6NI86 522 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 FAM159BA6NKW6 160 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 C4orf47A7E2U8 309 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 CFAP99D6REC4 459 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 GDF9O60383 454 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 CDH16O75309 829 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 PIAS2O75928 621 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 SASH3O75995 380 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 GOT2P00505 430 aaKnown RBP15.33■□□□□ 0.04
SS18-216ENST00000580751 RALBP11234 206 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 AKT1P31749 480 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 GTF2H3Q13889 308 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 SHBQ15464 509 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 AARS2Q5JTZ9 985 aaKnown RBP15.33■□□□□ 0.04
SS18-216ENST00000580751 HP1BP3Q5SSJ5 553 aaPredicted RBP15.33■□□□□ 0.04
SS18-216ENST00000580751 TAS2R42Q7RTR8 314 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 RD3Q7Z3Z2 195 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 LRRC6Q86X45 466 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 GALNT13Q8IUC8 556 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 RBFAQ8N0V3 343 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 FSTL5Q8N475 847 aaPredicted RBP15.33■□□□□ 0.04
SS18-216ENST00000580751 GOLGA6L1Q8N7Z2 621 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 ZNF548Q8NEK5 533 aaPredicted RBP15.33■□□□□ 0.04
SS18-216ENST00000580751 OR4L1Q8NH43 312 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 SAP25Q8TEE9 199 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 FBF1Q8TES7 1133 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 ZNF669Q96BR6 464 aaPredicted RBP15.33■□□□□ 0.04
SS18-216ENST00000580751 CERS2Q96G23 380 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 SCARF2Q96GP6 870 aaPredicted RBP15.33■□□□□ 0.04
SS18-216ENST00000580751 TTC1Q99614 292 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 COPS8Q99627 209 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 STMN4Q9H169 189 aaPredicted RBP15.33■□□□□ 0.04
SS18-216ENST00000580751 OR2AG1Q9H205 316 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 MED4Q9NPJ6 270 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms