RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PLAC1Q9HBJ0 212 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 FETUBQ9UGM5 382 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 ZNHIT2Q9UHR6 403 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 MOSPD1Q9UJG1 213 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 SLC17A4Q9Y2C5 497 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 CA5BQ9Y2D0 317 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 ANKRD6Q9Y2G4 727 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 DGKBQ9Y6T7 804 aa14.12□□□□□ -0.15
SKA2-205ENST00000580541 EXOC1LA0A1B0GW35 172 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 KHNYNO15037 678 aaKnown RBP14.11□□□□□ -0.15
SKA2-205ENST00000580541 KMOO15229 486 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 GRID2O43424 1007 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 NUAK1O60285 661 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 FOXD2O60548 495 aaPredicted RBP14.11□□□□□ -0.15
SKA2-205ENST00000580541 RASGRP1O95267 797 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 LMNAP02545 664 aaKnown RBP14.11□□□□□ -0.15
SKA2-205ENST00000580541 FTH1P02794 183 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 CFIP05156 583 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 CNTFP26441 200 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 HSD17B3P37058 310 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 GP5P40197 560 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 NBL1P41271 181 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 SLC1A2P43004 574 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 CD151P48509 253 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 POLD2P49005 469 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 ARRB1P49407 418 aaPredicted RBP14.11□□□□□ -0.15
SKA2-205ENST00000580541 SERPINB9P50453 376 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 EIF3BP55884 814 aaKnown RBP14.11□□□□□ -0.15
SKA2-205ENST00000580541 NXPH1P58417 271 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 SRP54P61011 504 aaKnown RBP14.11□□□□□ -0.15
SKA2-205ENST00000580541 IFFO1Q0D2I5 559 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 LPAL2Q16609 132 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 UGT3A1Q6NUS8 523 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 SLC23A3Q6PIS1 610 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 DOK6Q6PKX4 331 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 MARK2Q7KZI7 788 aaKnown RBP14.11□□□□□ -0.15
SKA2-205ENST00000580541 LRRTM4Q86VH4 590 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 GALNT13Q8IUC8 556 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 DENND6AQ8IWF6 608 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 UNC5BQ8IZJ1 945 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 PELI3Q8N2H9 469 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 SDR16C5Q8N3Y7 309 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 SCARF2Q96GP6 870 aaPredicted RBP14.11□□□□□ -0.15
SKA2-205ENST00000580541 PKNOX2Q96KN3 472 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 GPR27Q9NS67 375 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 TMEM74BQ9NUR3 256 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 IL1RAPL1Q9NZN1 696 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 MARCH4Q9P2E8 410 aaPredicted RBP14.11□□□□□ -0.15
SKA2-205ENST00000580541 ATXN10Q9UBB4 475 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 TMPRSS11EQ9UL52 423 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 TMEM98Q9Y2Y6 226 aa14.11□□□□□ -0.15
SKA2-205ENST00000580541 PRSS38A1L453 326 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 TMEM202A6NGA9 273 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 CHUKO15111 745 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 YKT6O15498 198 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 LRP3O75074 770 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 AHSGP02765 367 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 CEACAM5P06731 702 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 CTSEP14091 401 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 ZNF8P17098 575 aaPredicted RBP14.1□□□□□ -0.15
SKA2-205ENST00000580541 MPLP40238 635 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 SKIV2L2P42285 1042 aaKnown RBP14.1□□□□□ -0.15
SKA2-205ENST00000580541 HNRNPKP61978 463 aaKnown RBP eCLIP14.1□□□□□ -0.15
SKA2-205ENST00000580541 PLOD1Q02809 727 aaPredicted RBP14.1□□□□□ -0.15
SKA2-205ENST00000580541 LRP8Q14114 963 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 BCL7AQ4VC05 210 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 TMEM220Q6QAJ8 160 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 LDB1Q86U70 411 aaPredicted RBP14.1□□□□□ -0.15
SKA2-205ENST00000580541 TRAPPC5Q8IUR0 188 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 VPS39Q96JC1 886 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 ROPN1BQ9BZX4 212 aaPredicted RBP14.1□□□□□ -0.15
SKA2-205ENST00000580541 ARRDC1-AS1Q9H2J1 176 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 RHOJQ9H4E5 214 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 ROPN1Q9HAT0 212 aaPredicted RBP14.1□□□□□ -0.15
SKA2-205ENST00000580541 CYP4F12Q9HCS2 524 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 FBXO6Q9NRD1 293 aaPredicted RBP14.1□□□□□ -0.15
SKA2-205ENST00000580541 TRNAU1APQ9NX07 287 aaKnown RBP14.1□□□□□ -0.15
SKA2-205ENST00000580541 SLC24A2Q9UI40 661 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 CRYL1Q9Y2S2 319 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 OAS3Q9Y6K5 1087 aaKnown RBP14.1□□□□□ -0.15
SKA2-205ENST00000580541 KNL1Q8NG31 2342 aa14.1□□□□□ -0.15
SKA2-205ENST00000580541 UQCRHLA0A096LP55 91 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 C17orf113A0A1B0GUU1 675 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 A0A1B0GVT2 93 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 E5RI56 91 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 POC1B-GALNT4F8VUJ3 575 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 GPR39O43194 453 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 MTX2O75431 263 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 KRT38O76015 456 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 HAUS5O94927 633 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 CER1O95813 267 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 CSF2P04141 144 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 WNT1P04628 370 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 UQCRHP07919 91 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 NUDT17P0C025 328 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 PRSS56P0CW18 603 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 PKMP14618 531 aaKnown RBP14.09□□□□□ -0.15
SKA2-205ENST00000580541 FMO4P31512 558 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 HK3P52790 923 aa14.09□□□□□ -0.15
SKA2-205ENST00000580541 ATXN3P54252 364 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms