RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ULK2Q8IYT8 1036 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CHPFQ8IZ52 775 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CENPLQ8N0S6 344 aaPredicted RBP12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SLC44A3Q8N4M1 653 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CFAP61Q8NHU2 1237 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SCG3Q8WXD2 468 aaKnown RBP12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 FAM129BQ96TA1 746 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SIKE1Q9BRV8 207 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TMEM245Q9H330 911 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 COG4Q9H9E3 785 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 IL26Q9NPH9 171 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 OXSMQ9NWU1 459 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 DLGAP2Q9P1A6 1054 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RPL26L1Q9UNX3 145 aaKnown RBP12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PKP3Q9Y446 797 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MYO10Q9HD67 2058 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 COL4A3Q01955 1670 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 KIF26AQ9ULI4 1882 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 UBA6A0AVT1 1052 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 LMNAP02545 664 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ASLP04424 464 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 APOA4P06727 396 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 BPIP17213 487 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 MPSTP25325 297 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 XIAPP98170 497 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ZNF549Q6P9A3 640 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 MTSS1LQ765P7 747 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 TAS2R42Q7RTR8 314 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 GPR26Q8NDV2 337 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 MAPK15Q8TD08 544 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 CSGALNACT1Q8TDX6 532 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 STMN2Q93045 179 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 TUBGCP5Q96RT8 1024 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 C1QTNF1Q9BXJ1 281 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 PCDH12Q9NPG4 1184 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 C16orf96A6NNT2 1141 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 K7EQS6 105 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 GAPDHSO14556 408 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 BAG2O95816 211 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 GRIA2P42262 883 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 CDKN2DP55273 166 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 PON2Q15165 354 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 RNF220Q5VTB9 566 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 LIPMQ5VYY2 423 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 OR52E8Q6IFG1 317 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 IRGCQ6NXR0 463 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 PARS2Q7L3T8 475 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 GALNT15Q8N3T1 639 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ZNF641Q96N77 438 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ILKAPQ9H0C8 392 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 CDH19Q9H159 772 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 PRDM6Q9NQX0 595 aa12.58□□□□□ -0.4
CDK5RAP3-217ENST00000580287 TMEM265A0A087WTH1 108 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 A0A1W2PPC1 479 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 DCXO43602 365 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 FMO4P31512 558 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 VHLP40337 213 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 LEPRP48357 1165 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ZYG11AQ6WRX3 759 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 TMPRSS6Q8IU80 811 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 SCUBE1Q8IWY4 988 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ZNF513Q8N8E2 541 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 PHC3Q8NDX5 983 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 GABPB2Q8TAK5 448 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 CALML6Q8TD86 181 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 PYDC1Q8WXC3 89 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 SCAMP4Q969E2 229 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 GUCD1Q96NT3 240 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 P2RY13Q9BPV8 354 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 SLC6A17Q9H1V8 727 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 STOML1Q9UBI4 398 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 PPM1HQ9ULR3 514 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 IQCF5A8MTL0 148 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 TMEM114B3SHH9 223 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 PRAMEF1O95521 474 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 APODP05090 189 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 SBK3P0C264 359 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 CRABP2P29373 138 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 CTHP32929 405 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 MSX2P35548 267 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 DLG1Q12959 904 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 EIF4HQ15056 248 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 CHRNA6Q15825 494 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 SLC9B1Q4ZJI4 515 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ZNF805Q5CZA5 627 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ARL13AQ5H913 290 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 C1orf146Q5VVC0 180 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 LRRC74BQ6ZQY2 392 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 TPRG1Q6ZUI0 275 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 USP45Q70EL2 814 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 ARHGAP24Q8N264 748 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 PIP4K2CQ8TBX8 421 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 HEXDCQ8WVB3 486 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 WRAP53Q9BUR4 548 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 BOCQ9BWV1 1114 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 WDR55Q9H6Y2 383 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 GPAMQ9HCL2 828 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 CYP4F12Q9HCS2 524 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 PRSS16Q9NQE7 514 aa12.57□□□□□ -0.4
CDK5RAP3-217ENST00000580287 DNAJC28Q9NX36 388 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms