RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 EML5Q05BV3 1969 aa10.62□□□□□ -0.71
SS18-213ENST00000579640 MEI4A8MW99 385 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 HMGB1P1B2RPK0 211 aaPredicted RBP10.61□□□□□ -0.71
SS18-213ENST00000579640 VPS26AO75436 327 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 SYF2O95926 243 aaKnown RBP10.61□□□□□ -0.71
SS18-213ENST00000579640 STMN1P16949 149 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 KELP23276 732 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 CD27P26842 260 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 CRABP2P29373 138 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 CNR2P34972 360 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 MAGEA12P43365 314 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 B4GALNT1Q00973 533 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 CTSL3PQ5NE16 218 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 RBM20Q5T481 1227 aaKnown RBP10.61□□□□□ -0.71
SS18-213ENST00000579640 UGT3A1Q6NUS8 523 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 KYAT3Q6YP21 454 aaKnown RBP10.61□□□□□ -0.71
SS18-213ENST00000579640 GAB3Q8WWW8 586 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 ATP6V1G3Q96LB4 118 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 NDNQ99608 321 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 EBF2Q9HAK2 575 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 FZD3Q9NPG1 666 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 TAS2R13Q9NYV9 303 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 SLC39A10Q9ULF5 831 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 INVSQ9Y283 1065 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 DOCK9Q9BZ29 2069 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 A6NNZ2 444 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 E5RI56 91 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 TPP1O14773 563 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 MTX2O75431 263 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 RHOBTB1O94844 696 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 CDK14O94921 469 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 FTH1P02794 183 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 MPOP05164 745 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 GSTM1P09488 218 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 FDXRP22570 491 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 TYK2P29597 1187 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 SKIV2L2P42285 1042 aaKnown RBP10.61□□□□□ -0.71
SS18-213ENST00000579640 RABIFP47224 123 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 TAS2R39P59534 338 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 PFN3P60673 137 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 RAB10P61026 200 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 GSTM4Q03013 218 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 ZKSCAN8Q15776 578 aaPredicted RBP10.61□□□□□ -0.71
SS18-213ENST00000579640 BCL7AQ4VC05 210 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 WDR45BQ5MNZ6 344 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 GCNT7Q6ZNI0 430 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 LPCAT2Q7L5N7 544 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 ABI3BPQ7Z7G0 1075 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 ADGRG6Q86SQ4 1221 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 SLC41A1Q8IVJ1 513 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 SNX19Q92543 992 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 NELL1Q92832 810 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 FUBP1Q96AE4 644 aaKnown RBP10.61□□□□□ -0.71
SS18-213ENST00000579640 ARL8AQ96BM9 186 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 ALKBH8Q96BT7 664 aaKnown RBP10.61□□□□□ -0.71
SS18-213ENST00000579640 TLCD1Q96CP7 247 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 SERAC1Q96JX3 654 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 MYOCQ99972 504 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 RMI1Q9H9A7 625 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 SNX15Q9NRS6 342 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.61□□□□□ -0.71
SS18-213ENST00000579640 KLHL42Q9P2K6 505 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 NOVA2Q9UNW9 492 aaKnown RBP10.61□□□□□ -0.71
SS18-213ENST00000579640 GPR34Q9UPC5 381 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 PRSS21Q9Y6M0 314 aa10.61□□□□□ -0.71
SS18-213ENST00000579640 KPNA5O15131 536 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 MAGEC1O60732 1142 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 RFPL1O75677 317 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 ASMTLO95671 621 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 ALDOAP04075 364 aaKnown RBP10.6□□□□□ -0.71
SS18-213ENST00000579640 CHRM3P20309 590 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 BCKDHBP21953 392 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 HTR1BP28222 390 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 PRLHRP49683 370 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 NFATC4Q14934 902 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 KHDC1Q4VXA5 237 aaKnown RBP10.6□□□□□ -0.71
SS18-213ENST00000579640 TAF1BQ53T94 588 aaPredicted RBP10.6□□□□□ -0.71
SS18-213ENST00000579640 CLDN19Q8N6F1 224 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 RASGEF1AQ8N9B8 481 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 CCDC97Q96F63 343 aaPredicted RBP10.6□□□□□ -0.71
SS18-213ENST00000579640 BMFQ96LC9 184 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 HSPA12BQ96MM6 686 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 SMC6Q96SB8 1091 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 OLFM1Q99784 485 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 ORAI3Q9BRQ5 295 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 COL25A1Q9BXS0 654 aaPredicted RBP10.6□□□□□ -0.71
SS18-213ENST00000579640 OR2AG1Q9H205 316 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 SYTL2Q9HCH5 934 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 LATS2Q9NRM7 1088 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 ZSCAN32Q9NX65 697 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 ATXN10Q9UBB4 475 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 TLK1Q9UKI8 766 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 ANKRD6Q9Y2G4 727 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 OR1A2Q9Y585 309 aa10.6□□□□□ -0.71
SS18-213ENST00000579640 OAS3Q9Y6K5 1087 aaKnown RBP10.6□□□□□ -0.71
SS18-213ENST00000579640 ZDBF2Q9HCK1 2354 aa10.59□□□□□ -0.71
SS18-213ENST00000579640 A0A087X1B8 175 aa10.59□□□□□ -0.71
SS18-213ENST00000579640 A0A1W2PPM1 405 aa10.59□□□□□ -0.71
SS18-213ENST00000579640 KLHL33A6NCF5 533 aa10.59□□□□□ -0.71
SS18-213ENST00000579640 POM121BA6NF01 834 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms