RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PCDHB1Q9Y5F3 818 aa6.47□□□□□ -1.37
TRAF4-213ENST00000578917 PKD1L2Q7Z442 2459 aa6.47□□□□□ -1.37
TRAF4-213ENST00000578917 ZFYVE26Q68DK2 2539 aa6.46□□□□□ -1.37
TRAF4-213ENST00000578917 KIR2DS5A0A0G2JLQ3 304 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 A0A0G2JNG1 304 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 GOLGA6L10A0A0M3HER8 536 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 OR2AG2A6NM03 316 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 D6RAR5 112 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 KIR2DS3K7RE56 304 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 AP3B1O00203 1094 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 CCL22O00626 93 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 PPM1DO15297 605 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 B4GAT1O43505 415 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 BRINP1O60477 761 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 TNFSF15O95150 251 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 CPNE6O95741 557 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 APC2O95996 2303 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 POLBP06746 335 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 JMJD7P0C870 316 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 ZSCAN5DPP0CG00 497 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 F3P13726 295 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 AMD1P17707 334 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 PBLDP30039 288 aaPredicted RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 MC4RP32245 332 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 RPL22P35268 128 aaKnown RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 KCNJ1P48048 391 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 LSSP48449 732 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 VPS41P49754 854 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 DRG2P55039 364 aaKnown RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 SESN2P58004 480 aaPredicted RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 GNG11P61952 73 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 SARNPP82979 210 aaKnown RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 HHEXQ03014 270 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 ACACAQ13085 2346 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 CAMK2BQ13554 666 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 KIR2DS5Q14953 304 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 TRIP13Q15645 432 aaPredicted RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 OASLQ15646 514 aaKnown RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 GPR33Q49SQ1 333 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 SNAP47Q5SQN1 464 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 CDCP2Q5VXM1 449 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 NKAIN2Q5VXU1 208 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 DENND5AQ6IQ26 1287 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 TMEM220Q6QAJ8 160 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 RAB11FIP2Q7L804 512 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 SPRED1Q7Z699 444 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 PRUNE1Q86TP1 453 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 ZNF761Q86XN6 746 aaPredicted RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 PROSER1Q86XN7 944 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 NAGSQ8N159 534 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 FBXO39Q8N4B4 442 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 BEND7Q8N7W2 519 aaPredicted RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 RASGEF1AQ8N9B8 481 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 AVL9Q8NBF6 648 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 OR13C4Q8NGS5 318 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 OR6P1Q8NGX9 317 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 WDR36Q8NI36 951 aaKnown RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 DTX3LQ8TDB6 740 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 SLC37A2Q8TED4 501 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 HEXDCQ8WVB3 486 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 NCSTNQ92542 709 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 FGF11Q92914 225 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 ULK4Q96C45 1275 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 MS4A14Q96JA4 679 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 COPS8Q99627 209 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 CMKLR1Q99788 373 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 GORASP1Q9BQQ3 440 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 AP1M1Q9BXS5 423 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 ARNT2Q9HBZ2 717 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 THSD1Q9NS62 852 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 SMARCAL1Q9NZC9 954 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 NFKBIL1Q9UBC1 381 aaPredicted RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 CPNE7Q9UBL6 633 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 SLC23A2Q9UGH3 650 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 RABGEF1Q9UJ41 708 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 ANAPC5Q9UJX4 755 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 ATXN7L1Q9ULK2 861 aaPredicted RBP6.46□□□□□ -1.38
TRAF4-213ENST00000578917 SATB2Q9UPW6 733 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 ST14Q9Y5Y6 855 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 DOCK9Q9BZ29 2069 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 ITPR1Q14643 2758 aa6.46□□□□□ -1.38
TRAF4-213ENST00000578917 CCDC187A0A096LP49 1063 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 A0A1W2PQM1 296 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 HEATR9A2RTY3 570 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 SRRM3A6NNA2 597 aaPredicted RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 PGRMC1O00264 195 aaKnown RBP6.45□□□□□ -1.38
TRAF4-213ENST00000578917 PLD2O14939 933 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 CHUKO15111 745 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 GPR39O43194 453 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 LDB2O43679 373 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 DUX1O43812 170 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 KCNJ13O60928 360 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 EML2O95834 649 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 KRT14P02533 472 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 SLC35G4P0C7Q5 338 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 ADRA1DP25100 572 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 MPSTP25325 297 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 CD1CP29017 333 aa6.45□□□□□ -1.38
TRAF4-213ENST00000578917 CSTF2P33240 577 aaKnown RBP eCLIP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms