RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CADM4Q8NFZ8 388 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 SLC44A1Q8WWI5 657 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 ANAPC16Q96DE5 110 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 ERLEC1Q96DZ1 483 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 VPS35Q96QK1 796 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 TTC1Q99614 292 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 MDFIQ99750 246 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 CPNE1Q99829 537 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 FAM167BQ9BTA0 163 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 MCMBPQ9BTE3 642 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 ZSCAN5AQ9BUG6 496 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 FAM126AQ9BYI3 521 aaPredicted RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 SLC17A9Q9BYT1 436 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 ABCG8Q9H221 673 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 SUDS3Q9H7L9 328 aaPredicted RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 PPANQ9NQ55 473 aaKnown RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 PRMT8Q9NR22 394 aaPredicted RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 SMYD2Q9NRG4 433 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 SMOXQ9NWM0 555 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 ZNF446Q9NWS9 450 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 BCCIPQ9P287 314 aaKnown RBP eCLIP7.95□□□□□ -1.14
COPS3-215ENST00000578317 ZNF180Q9UJW8 692 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 ZFR2Q9UPR6 939 aaKnown RBP7.95□□□□□ -1.14
COPS3-215ENST00000578317 PLAAQ9Y263 795 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 SLC30A1Q9Y6M5 507 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 WDFY4Q6ZS81 3184 aa7.95□□□□□ -1.14
COPS3-215ENST00000578317 TBC1D3DA0A087WVF3 549 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TBC1D3IA0A087WXS9 549 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TBC1D3EA0A087X179 549 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TBC1D3KA0A087X1G2 549 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 EXOC1LA0A1B0GW35 172 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 A0A1W2PQU0 124 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 CCDC78A2IDD5 438 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TBC1D3FA6NER0 549 aaPredicted RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 CXorf49A8MYA2 514 aaPredicted RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 TBC1D3LB9A6J9 549 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 PFDN6O15212 129 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 RNGTTO60942 597 aaKnown RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 CDH16O75309 829 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 FAM155BO75949 473 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 WFS1O76024 890 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 PRAMEF1O95521 474 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 SEMA4FO95754 770 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 AHSGP02765 367 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 IVLP07476 585 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TBC1D3HP0C7X1 549 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TDGF1P13385 188 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 ITGALP20701 1170 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 MC4RP32245 332 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TRIM23P36406 574 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TTPAP49638 278 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 PCBP4P57723 403 aaKnown RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 TMPRSS15P98073 1019 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 PCDH1Q08174 1060 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 SGCGQ13326 291 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 ITGA9Q13797 1035 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 ACOX1Q15067 660 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 CHRNA6Q15825 494 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 USP39Q53GS9 565 aaKnown RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 FASTKD1Q53R41 847 aaKnown RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 RNF187Q5TA31 235 aaPredicted RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 GRTP1Q5TC63 336 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 LGSNQ5TDP6 509 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TBC1D3GQ6DHY5 549 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TBC1D3CQ6IPX1 549 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 BNC2Q6ZN30 1099 aaPredicted RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 RFLNAQ6ZTI6 216 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 PTAR1Q7Z6K3 402 aaPredicted RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 CACUL1Q86Y37 369 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 C1orf210Q8IVY1 113 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TBC1D3Q8IZP1 549 aaPredicted RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 RIBC1Q8N443 379 aaPredicted RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 FBXL6Q8N531 539 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 DENND6BQ8NEG7 585 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 HEXDCQ8WVB3 486 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 GATAD2BQ8WXI9 593 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 SCAMP4Q969E2 229 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 CENPTQ96BT3 561 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 ULK4Q96C45 1275 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 AP2M1Q96CW1 435 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TOE1Q96GM8 510 aaKnown RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 ZIM3Q96PE6 472 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 AGAP2Q99490 1192 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 WRAP53Q9BUR4 548 aaKnown RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 C1QTNF7Q9BXJ2 289 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 ASB8Q9H765 288 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 CATSPERZQ9NTU4 200 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 INTS10Q9NVR2 710 aaKnown RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 SPATA6Q9NWH7 488 aaPredicted RBP7.94□□□□□ -1.14
COPS3-215ENST00000578317 FBXO5Q9UKT4 447 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 FBXO4Q9UKT5 387 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 CYP8B1Q9UNU6 501 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 DMTF1Q9Y222 760 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 CKAP5Q14008 2032 aa7.94□□□□□ -1.14
COPS3-215ENST00000578317 TECTAO75443 2155 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 IGLV3-16A0A075B6K0 115 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 IGHV1OR15-9A0A0B4J2B8 117 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 GOLGA8KD6RF30 607 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 GOLGA8TH3BQL2 631 aa7.93□□□□□ -1.14
COPS3-215ENST00000578317 AGPSO00116 658 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms