RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 UBE2Q2Q8WVN8 375 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 ZFPM2Q8WW38 1151 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 HTR3CQ8WXA8 447 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 ART4Q93070 314 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 CATSPER2Q96P56 530 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 QKIQ96PU8 341 aaKnown RBP eCLIP14.29□□□□□ -0.122e-13■■■■■ 29.8
SMARCE1-213ENST00000578044 PANX2Q96RD6 677 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 FERMT1Q9BQL6 677 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 SUDS3Q9H7L9 328 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 STARD5Q9NSY2 213 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 SLC39A1Q9NY26 324 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 IL17CQ9P0M4 197 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 TUBD1Q9UJT1 453 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 SHOC2Q9UQ13 582 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 B3GALT1Q9Y5Z6 326 aa14.29□□□□□ -0.12
SMARCE1-213ENST00000578044 GOLGA6L3A6NEY3 463 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 CDK14O94921 469 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 PYGMP11217 842 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 CYLC1P35663 651 aaPredicted RBP14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 WNT3AP56704 352 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 ITGA9Q13797 1035 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 SPA17Q15506 151 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 SLC1A5Q15758 541 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 LINC00303Q3SY05 128 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 LDLRAP1Q5SW96 308 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 C11orf96Q7Z7L8 435 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 ZNF547Q8IVP9 402 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 TTC30BQ8N4P2 665 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 DDHD1Q8NEL9 900 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 LRRN4Q8WUT4 740 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 RTP4Q96DX8 246 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 SLC45A3Q96JT2 553 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 SLC12A9Q9BXP2 914 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 IL26Q9NPH9 171 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 KLC4Q9NSK0 619 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 KCNK6Q9Y257 313 aa14.28□□□□□ -0.12
SMARCE1-213ENST00000578044 J3QKU1 62 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 PMPCBO75439 489 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 ANXA9O76027 345 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 RECKO95980 971 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 PECAM1P16284 738 aaPredicted RBP14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 IDSP22304 550 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 CTNNA1P35221 906 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 NOP2P46087 812 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 DYNLT1P63172 113 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 ABHD18Q0P651 414 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 TMEM115Q12893 351 aaPredicted RBP14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 IL11RAQ14626 422 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 ATP13A5Q4VNC0 1218 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 SIRPB2Q5JXA9 342 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 KIAA1614Q5VZ46 1190 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 KLHDC8BQ8IXV7 354 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 ZNF567Q8N184 647 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 NCSTNQ92542 709 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 MRGPRX2Q96LB1 330 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 C9orf72Q96LT7 481 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 FCRL4Q96PJ5 515 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 CEP41Q9BYV8 373 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 FAM117AQ9C073 453 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 SEMA4CQ9C0C4 833 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 SLC40A1Q9NP59 571 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 PRDM8Q9NQV8 689 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 GEMIN8Q9NWZ8 242 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 OCIAD1Q9NX40 245 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 SIDT1Q9NXL6 827 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 TMEM9Q9P0T7 183 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 FEZ2Q9UHY8 353 aaPredicted RBP14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 TMPRSS11EQ9UL52 423 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 PRKAB1Q9Y478 270 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 PCDHA3Q9Y5H8 950 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 PCDHA13Q9Y5I0 950 aa14.27□□□□□ -0.13
SMARCE1-213ENST00000578044 CCDC66A2RUB6 948 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 C5orf60A6NFR6 353 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 EFCAB7A8K855 629 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 AGAP14A8MT82 685 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 UBXN7O94888 489 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 VIPP01282 170 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 NFKB1P19838 968 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 SPAM1P38567 509 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 SLC19A1P41440 591 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 PDE1BQ01064 536 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 NFATC2Q13469 925 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 LY6DQ14210 128 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 NOMO1Q15155 1222 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 PCSK7Q16549 785 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 INSCQ1MX18 579 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 ITPRIPL1Q6GPH6 555 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 RANBP10Q6VN20 620 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 PID1Q7Z2X4 250 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 PRSS42Q7Z5A4 293 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 BPHLQ86WA6 291 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 TMTC1Q8IUR5 882 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 CACNA2D3Q8IZS8 1091 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 NLGN4XQ8N0W4 816 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 CARFQ8N187 725 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 IL22RA1Q8N6P7 574 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 BEND7Q8N7W2 519 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 EXD3Q8N9H8 876 aa14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 NLGN4YQ8NFZ3 816 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-213ENST00000578044 OXNAD1Q96HP4 312 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms