RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SEPT7Q16181 437 aaKnown RBP13.13□□□□□ -0.31
COPS3-214ENST00000577246 EIF2S3LQ2VIR3 472 aaKnown RBP13.13□□□□□ -0.31
COPS3-214ENST00000577246 CCDC122Q5T0U0 273 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 AGAP9Q5VTM2 703 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 CPZQ66K79 652 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 PWWP2BQ6NUJ5 590 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 JMJD6Q6NYC1 403 aaPredicted RBP13.13□□□□□ -0.31
COPS3-214ENST00000577246 ABRAXAS1Q6UWZ7 409 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 WASH2PQ6VEQ5 465 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 KMT5CQ86Y97 462 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 OR8K5Q8NH50 307 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 MAML1Q92585 1016 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 RSC1A1Q92681 617 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 FATE1Q969F0 183 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 ZNF653Q96CK0 615 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 SLC41A2Q96JW4 573 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 SMIM14Q96QK8 99 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 TRIM7Q9C029 511 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 SLC40A1Q9NP59 571 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 WASH6PQ9NQA3 447 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 RBM22Q9NW64 420 aaKnown RBP eCLIP13.13□□□□□ -0.31
COPS3-214ENST00000577246 SCHIP1Q9P0W5 487 aaPredicted RBP13.13□□□□□ -0.31
COPS3-214ENST00000577246 ZNF624Q9P2J8 865 aaPredicted RBP13.13□□□□□ -0.31
COPS3-214ENST00000577246 FARSAQ9Y285 508 aaKnown RBP13.13□□□□□ -0.31
COPS3-214ENST00000577246 ADGRG1Q9Y653 693 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 ICE1Q9Y2F5 2266 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 CHUKO15111 745 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 KIF1CO43896 1103 aaKnown RBP13.12□□□□□ -0.31
COPS3-214ENST00000577246 VEGFDO43915 354 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 FTLP02792 175 aaPredicted RBP13.12□□□□□ -0.31
COPS3-214ENST00000577246 IL1R2P27930 398 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 DCDC1P59894 354 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 GPR18Q14330 331 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 PIGHQ14442 188 aaPredicted RBP13.12□□□□□ -0.31
COPS3-214ENST00000577246 IFI16Q16666 785 aaKnown RBP13.12□□□□□ -0.31
COPS3-214ENST00000577246 ZNF787Q6DD87 383 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 CRTC3Q6UUV7 619 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 IRF2BP2Q7Z5L9 587 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 TICAM1Q8IUC6 712 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.12□□□□□ -0.31
COPS3-214ENST00000577246 GLYATL1Q969I3 302 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 PNPLA2Q96AD5 504 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 ZNF514Q96K75 400 aaPredicted RBP13.12□□□□□ -0.31
COPS3-214ENST00000577246 CD180Q99467 661 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 SYT11Q9BT88 431 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 ZFYVE1Q9HBF4 777 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 PCDH18Q9HCL0 1135 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 FANCLQ9NW38 375 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 SEMA5BQ9P283 1151 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 LIMA1Q9UHB6 759 aaKnown RBP13.12□□□□□ -0.31
COPS3-214ENST00000577246 DNAJC16Q9Y2G8 782 aa13.12□□□□□ -0.31
COPS3-214ENST00000577246 WIPF3A6NGB9 483 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 ANKRD66B4E2M5 251 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 CEACAM4O75871 244 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 TIAF1O95411 115 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 PRLP01236 227 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 JCHAINP01591 159 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 KLK3P07288 261 aaPredicted RBP13.11□□□□□ -0.31
COPS3-214ENST00000577246 RNF224P0DH78 156 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 RARAP10276 462 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
COPS3-214ENST00000577246 CCNCP24863 283 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 RRADP55042 308 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 GSDMDP57764 484 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 RPS18P62269 152 aaKnown RBP13.11□□□□□ -0.31
COPS3-214ENST00000577246 GALNT2Q10471 571 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 CHAF1BQ13112 559 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 MRPL49Q13405 166 aaKnown RBP13.11□□□□□ -0.31
COPS3-214ENST00000577246 PLA2G4EQ3MJ16 856 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 IZUMO3Q5VZ72 239 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 ADGRG6Q86SQ4 1221 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 TMEM126BQ8IUX1 230 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 TRAM1L1Q8N609 369 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 C5orf34Q96MH7 638 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 FGF21Q9NSA1 209 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 TMEM63CQ9P1W3 806 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 NFKBIL1Q9UBC1 381 aaPredicted RBP13.11□□□□□ -0.31
COPS3-214ENST00000577246 SLC5A6Q9Y289 635 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 CREBBPQ92793 2442 aa13.11□□□□□ -0.31
COPS3-214ENST00000577246 IGHV5-51A0A0C4DH38 117 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 OR52A4PA6NMU1 304 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 KCNJ13O60928 360 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 SCRG1O75711 98 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 TMEM63AO94886 807 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 CDK14O94921 469 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 LDLRP01130 860 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 FOLR1P15328 257 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 MX2P20592 715 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 FECHP22830 423 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 RPL10P27635 214 aaKnown RBP13.1□□□□□ -0.31
COPS3-214ENST00000577246 PTGIRP43119 386 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 TUBB4BP68371 445 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 HSD11B2P80365 405 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 IL10RAQ13651 578 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 TUBB2AQ13885 445 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 GTF2H3Q13889 308 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 QPCTQ16769 361 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
COPS3-214ENST00000577246 TMTC4Q5T4D3 741 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 ALS2CLQ60I27 953 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms