RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 DNAJC16Q9Y2G8 782 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 ZNF711Q9Y462 761 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 PCDHB3Q9Y5E6 796 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 HEY1Q9Y5J3 304 aa10.29□□□□□ -0.76
TVP23B-208ENST00000575261 LRRD1A4D1F6 860 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 PPP1R12AO14974 1030 aaPredicted RBP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 VEGFDO43915 354 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 ZNF28P17035 718 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 ZNF7P17097 686 aaPredicted RBP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 VCLP18206 1134 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 KDELR1P24390 212 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 DLSTP36957 453 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 SLC19A1P41440 591 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 SEPHS1P49903 392 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 SRSF1Q07955 248 aaKnown RBP eCLIP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 IL11RAQ14626 422 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 PDK1Q15118 436 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 SLC14A2Q15849 920 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 PCSK7Q16549 785 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 ATP1A1-AS1Q5TC04 95 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 SLC9A4Q6AI14 798 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 C6orf15Q6UXA7 325 aaPredicted RBP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 PRSS42Q7Z5A4 293 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 TMC3Q7Z5M5 1100 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 VSIG1Q86XK7 387 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 RASGRP3Q8IV61 690 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 RBM12BQ8IXT5 1001 aaKnown RBP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 RAPGEF5Q92565 580 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 IMP4Q96G21 291 aaKnown RBP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 AGAP3Q96P47 875 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 OLFM3Q96PB7 478 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 VPS35Q96QK1 796 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 SRPK1Q96SB4 655 aaKnown RBP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 BRD8Q9H0E9 1235 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 SLC25A51Q9H1U9 297 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 CBX8Q9HC52 389 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 SCHIP1Q9P0W5 487 aaPredicted RBP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 ZNF624Q9P2J8 865 aaPredicted RBP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 SLC23A2Q9UGH3 650 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 CROTQ9UKG9 612 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 MRPS18BQ9Y676 258 aaKnown RBP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 SLC30A1Q9Y6M5 507 aa10.28□□□□□ -0.76
TVP23B-208ENST00000575261 UTP20O75691 2785 aaKnown RBP10.28□□□□□ -0.76
TVP23B-208ENST00000575261 USP9YO00507 2555 aaPredicted RBP10.27□□□□□ -0.76
TVP23B-208ENST00000575261 USP9XQ93008 2570 aaPredicted RBP10.27□□□□□ -0.76
TVP23B-208ENST00000575261 PRRC2CQ9Y520 2896 aaKnown RBP10.27□□□□□ -0.77
TVP23B-208ENST00000575261 PRR19A6NJB7 356 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 OR52A4PA6NMU1 304 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 MKRN2OSH3BPM6 223 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 APOL1O14791 398 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 MTX2O75431 263 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 KIAA0754O94854 1291 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 CDK14O94921 469 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 NDUFA10O95299 355 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 ZFXP17010 805 aaPredicted RBP10.27□□□□□ -0.77
TVP23B-208ENST00000575261 BPIP17213 487 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 F8A1P23610 371 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 RPL10P27635 214 aaKnown RBP10.27□□□□□ -0.77
TVP23B-208ENST00000575261 LEPRP48357 1165 aaKnown RBP10.27□□□□□ -0.77
TVP23B-208ENST00000575261 SH3BP2P78314 561 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 CDK18Q07002 472 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 GTF2H3Q13889 308 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 UBAP2LQ14157 1087 aaKnown RBP10.27□□□□□ -0.77
TVP23B-208ENST00000575261 GPR18Q14330 331 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 SLC18A3Q16572 532 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 AGAP9Q5VTM2 703 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 CCDC70Q6NSX1 233 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 ABRAXAS1Q6UWZ7 409 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 WASH2PQ6VEQ5 465 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 LUZP1Q86V48 1076 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 TRAPPC5Q8IUR0 188 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 ZNF547Q8IVP9 402 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 PIP4P2Q8N4L2 257 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 GALNT6Q8NCL4 622 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 RSC1A1Q92681 617 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 TADA1Q96BN2 335 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 CXorf40BQ96DE9 158 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 ZDHHC12Q96GR4 267 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 MAK16Q9BXY0 300 aaKnown RBP10.27□□□□□ -0.77
TVP23B-208ENST00000575261 PACSIN1Q9BY11 444 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 DEF6Q9H4E7 631 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 SLC40A1Q9NP59 571 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 WASH6PQ9NQA3 447 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 ANKMY1Q9P2S6 941 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 LNPEPQ9UIQ6 1025 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 KCND3Q9UK17 655 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 POLHQ9Y253 713 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 TP53TG5Q9Y2B4 290 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 KCNMB2Q9Y691 235 aa10.27□□□□□ -0.77
TVP23B-208ENST00000575261 SPTAN1Q13813 2472 aaKnown RBP10.26□□□□□ -0.77
TVP23B-208ENST00000575261 A0A0A6YYK5 440 aaPredicted RBP10.26□□□□□ -0.77
TVP23B-208ENST00000575261 GOLGA6L3A6NEY3 463 aa10.26□□□□□ -0.77
TVP23B-208ENST00000575261 GOLGA6L19H0YKK7 550 aa10.26□□□□□ -0.77
TVP23B-208ENST00000575261 NDST3O95803 873 aa10.26□□□□□ -0.77
TVP23B-208ENST00000575261 MT-CYBP00156 380 aaPredicted RBP10.26□□□□□ -0.77
TVP23B-208ENST00000575261 MT-ND3P03897 115 aa10.26□□□□□ -0.77
TVP23B-208ENST00000575261 KRT1P04264 644 aa10.26□□□□□ -0.77
TVP23B-208ENST00000575261 TPM3P06753 285 aa10.26□□□□□ -0.77
TVP23B-208ENST00000575261 TMEM253P0C7T8 217 aa10.26□□□□□ -0.77
TVP23B-208ENST00000575261 FGF5P12034 268 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms