RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 RAPH1Q70E73 1250 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 CNPY4Q8N129 248 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 LGR4Q9BXB1 951 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 VPS11Q9H270 941 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 EBF2Q9HAK2 575 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 CA5BQ9Y2D0 317 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 ACTL7BQ9Y614 415 aa23.76■■□□□ 1.39
ATPAF1-213ENST00000574428 A0A096LPK6 155 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 CFAP99D6REC4 459 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 RALBP11234 206 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 ATP1B2P14415 290 aaPredicted RBP23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 CCR5P51681 352 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 CDK3Q00526 305 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 TMEM105Q8N8V8 129 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 BIRC7Q96CA5 298 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 TSPAN17Q96FV3 270 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 WDR26Q9H7D7 661 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 PRMT8Q9NR22 394 aaPredicted RBP23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 TOP3BO95985 862 aaKnown RBP23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 C2P06681 752 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 ITGB6P18564 788 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 NR1D1P20393 614 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 CCNFP41002 786 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 CSRP3P50461 194 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 CLDN2P57739 230 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 MACC1Q6ZN28 852 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 DEFB119Q8N690 84 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 RASGEF1AQ8N9B8 481 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 LKAAEAR1Q8TD35 194 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 SGF29Q96ES7 293 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 COX14Q96I36 57 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 TEX101Q9BY14 249 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 SLC13A1Q9BZW2 595 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 GALPQ9UBC7 116 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 COMMD10Q9Y6G5 202 aa23.75■■□□□ 1.39
ATPAF1-213ENST00000574428 DNAJC6O75061 913 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 NDUFS2O75306 463 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 SLC35E2BP0CK96 405 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 CHRM3P20309 590 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 HNRNPA2B1P22626 353 aaKnown RBP23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 IRF9Q00978 393 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 SLC18A2Q05940 514 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 TMEM115Q12893 351 aaPredicted RBP23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 ADGRG6Q86SQ4 1221 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 ACMSDQ8TDX5 336 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 HEXDCQ8WVB3 486 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 SPACA7Q96KW9 195 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 GPR21Q99679 349 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 SELENOSQ9BQE4 189 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 OR2AG1Q9H205 316 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 TAS2R13Q9NYV9 303 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 TMEM98Q9Y2Y6 226 aa23.74■■□□□ 1.39
ATPAF1-213ENST00000574428 OR2AG2A6NM03 316 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 E5RI56 91 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 LAMTOR5O43504 91 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 SGTAO43765 313 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 VPS26AO75436 327 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 MPOP05164 745 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 TEAD1P28347 426 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 CRABP2P29373 138 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 TRIM23P36406 574 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 USP39Q53GS9 565 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 DOK6Q6PKX4 331 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 BANPQ8N9N5 519 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 DENND6BQ8NEG7 585 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 SNX19Q92543 992 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 KCNJ9Q92806 393 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 FUBP1Q96AE4 644 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 SARS2Q9NP81 518 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 KCNK9Q9NPC2 374 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 TLK1Q9UKI8 766 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 TTC28Q96AY4 2481 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 POM121BA6NF01 834 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 H0Y8X5 98 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 TRIM16O95361 564 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 CTSCP53634 463 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 TAF1BQ53T94 588 aaPredicted RBP23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 SIDT2Q8NBJ9 832 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 APOPT1Q96IL0 206 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 SLC30A3Q99726 388 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 GPAMQ9HCL2 828 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 TRIM39Q9HCM9 518 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 ATXN10Q9UBB4 475 aa23.73■■□□□ 1.39
ATPAF1-213ENST00000574428 H3BMM5 538 aa23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 FPGTO14772 594 aa23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 OR56A5P0C7T3 313 aa23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 TDGF1P13385 188 aa23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 HOXA6P31267 233 aa23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 AKT2P31751 481 aa23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 FNTBP49356 437 aa23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 RPL6Q02878 288 aaKnown RBP23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 PDAP1Q13442 181 aaKnown RBP23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 BEND7Q8N7W2 519 aaPredicted RBP23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 GIMAP7Q8NHV1 300 aa23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 ZCCHC2Q9C0B9 1178 aaKnown RBP23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 PHPT1Q9NRX4 125 aaPredicted RBP23.72■■□□□ 1.39
ATPAF1-213ENST00000574428 EML5Q05BV3 1969 aa23.71■■□□□ 1.39
ATPAF1-213ENST00000574428 COPEO14579 308 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms