RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 PFDN6O15212 129 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 YY2O15391 372 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 STX7O15400 261 aaKnown RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 PYGLP06737 847 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 ALPIP09923 528 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 CTPS1P17812 591 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 LPOP22079 712 aaPredicted RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 MGAT1P26572 445 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 HMGCLP35914 325 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 EIF2S3P41091 472 aaKnown RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 BLKP51451 505 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 KIAA1024LP59773 190 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 SRP54P61011 504 aaKnown RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 DHX9Q08211 1270 aaKnown RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 ILF2Q12905 390 aaKnown RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 AGERQ15109 404 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 ELOCQ15369 112 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 ESRP1Q6NXG1 681 aaKnown RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 LRRC69Q6ZNQ3 347 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 ZNF534Q76KX8 674 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 TRMT10CQ7L0Y3 403 aaKnown RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 PALM2Q8IXS6 379 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 FSTL5Q8N475 847 aaPredicted RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 ARL10Q8N8L6 244 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 STYXQ8WUJ0 223 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 OR1E3Q8WZA6 343 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 GLMNQ92990 594 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 NAT6Q93015 286 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.75□□□□□ -0.53
NDE1-206ENST00000572967 FUBP1Q96AE4 644 aaKnown RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 CCDC74AQ96AQ1 378 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 ATXN7L3BQ96GX2 97 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 EBNA1BP2Q99848 306 aaKnown RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 KIFC1Q9BW19 673 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 WDR26Q9H7D7 661 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 GULP1Q9UBP9 304 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 MOSPD1Q9UJG1 213 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 SOX13Q9UN79 622 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 SATB2Q9UPW6 733 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 ZFC3H1O60293 1989 aaKnown RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 ASXL3Q9C0F0 2248 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 SCN8AQ9UQD0 1980 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 A0A0U1RQS6 177 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 NPIPB15A6NHN6 443 aaPredicted RBP11.74□□□□□ -0.53
NDE1-206ENST00000572967 B4DGG1 531 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 RRP8O43159 456 aaKnown RBP11.74□□□□□ -0.53
NDE1-206ENST00000572967 USP1O94782 785 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 SLC4A1P02730 911 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 LHCGRP22888 699 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 STX2P32856 288 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 GRIA1P42261 906 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 MAGEA4P43358 317 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 RPIAP49247 311 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 PDX1P52945 283 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 PRAMEP78395 509 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 SPIDRQ14159 915 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 IHHQ14623 411 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 PTPRRQ15256 657 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 ISXQ2M1V0 245 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 SPANXN3Q5MJ09 141 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 CERCAMQ5T4B2 595 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 LRRC66Q68CR7 880 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 ZNF449Q6P9G9 518 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 FOXR1Q6PIV2 292 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 RBM44Q6ZP01 1051 aaKnown RBP11.74□□□□□ -0.53
NDE1-206ENST00000572967 TSPAN33Q86UF1 283 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 GKN2Q86XP6 184 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 LMNTD2Q8IXW0 634 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 NRSN1Q8IZ57 195 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 CACTIN-AS1Q8N1I8 211 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 FBXO36Q8NEA4 188 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 OR56A4Q8NGH8 313 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 CALML6Q8TD86 181 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 TTC1Q99614 292 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 LGR4Q9BXB1 951 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 SYBUQ9NX95 663 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 NFKBIL1Q9UBC1 381 aaPredicted RBP11.74□□□□□ -0.53
NDE1-206ENST00000572967 RABGEF1Q9UJ41 708 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 APPL1Q9UKG1 709 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 PADI4Q9UM07 663 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 GPR34Q9UPC5 381 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 CHMP2BQ9UQN3 213 aa11.74□□□□□ -0.53
NDE1-206ENST00000572967 ZZEF1O43149 2961 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 DMXL2Q8TDJ6 3036 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 A0A1W2PNU3 283 aaPredicted RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 PRSS38A1L453 326 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 TMEM202A6NGA9 273 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 MROH6A6NGR9 719 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 TP73O15350 636 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 URB1O60287 2271 aaKnown RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 TNFP01375 233 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 TPH1P17752 444 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 ECHS1P30084 290 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 PPARGP37231 505 aaPredicted RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 ETV3P41162 512 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 ELK3P41970 407 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 STC1P52823 247 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 PCBP4P57723 403 aaKnown RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 DCDC1P59894 354 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 OLIG2Q13516 323 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms