RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 IGHV5-10-1A0A0J9YXX1 117 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 TMEM110-MUSTN1A8MSY1 372 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 FADS2P1A8MWK0 482 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 TOR1BO14657 336 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 SOCS5O75159 536 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 CLDN7O95471 211 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 ATP1A1P05023 1023 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 CYP1A2P05177 515 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 FAM87AP0C7U9 286 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 PIRTP0C851 137 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 ADCY8P40145 1251 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 SSR1P43307 286 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 HCAR3P49019 387 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 NSUN2Q08J23 767 aaKnown RBP eCLIP9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 RFTN1Q14699 578 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 LVRNQ6Q4G3 990 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 NPNTQ6UXI9 565 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 CCDC81Q6ZN84 652 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 ZNF605Q86T29 641 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 C17orf82Q86X59 251 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 FBXO27Q8NI29 283 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 ARRDC2Q8TBH0 407 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 SNRNP27Q8WVK2 155 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 EID2BQ96D98 161 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 PLPPR2Q96GM1 343 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 DPH1Q9BZG8 443 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 GSX1Q9H4S2 264 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 UBP1Q9NZI7 540 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 APPL1Q9UKG1 709 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 SLC17A4Q9Y2C5 497 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 SCINQ9Y6U3 715 aa9.17□□□□□ -0.94
NPLOC4-210ENST00000572824 NBPF19A0A087WUL8 3843 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 F5H423 210 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 SERPINC1P01008 464 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 SLC4A1P02730 911 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 MMP2P08253 660 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 CCDC172P0C7W6 258 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 JMJD7P0C870 316 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 FGF3P11487 239 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 CD1CP29017 333 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 ARL4AP40617 200 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 GARSP41250 739 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 ACTR1BP42025 376 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 GATA4P43694 442 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 ACTR1AP61163 376 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 RHDQ02161 417 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 ITKQ08881 620 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 GALNT2Q10471 571 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 MPP2Q14168 576 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 GALNT3Q14435 633 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 KRT81Q14533 505 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 CLCA4Q14CN2 919 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 LLGL1Q15334 1064 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 WIPI1Q5MNZ9 446 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 ARMC12Q5T9G4 340 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 HDXQ7Z353 690 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 PSTKQ8IV42 348 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 TEX26Q8N6G2 289 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 NIPA2Q8N8Q9 360 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 LPCAT1Q8NF37 534 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 ZNF564Q8TBZ8 553 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 FAM71BQ8TC56 605 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 SLC37A2Q8TED4 501 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 NAT14Q8WUY8 206 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 RAPGEF5Q92565 580 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 AP2M1Q96CW1 435 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 ZNF599Q96NL3 588 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 FANCD2OSQ96PS1 177 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 CCNL2Q96S94 520 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 CTRCQ99895 268 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 RIOK2Q9BVS4 552 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 TDRD1Q9BXT4 1180 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 PHPT1Q9NRX4 125 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 OCIAD1Q9NX40 245 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 IFNKQ9P0W0 207 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 CNOT6Q9ULM6 557 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 KCNK6Q9Y257 313 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 HIF3AQ9Y2N7 669 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 HYOU1Q9Y4L1 999 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 PCDHGA7Q9Y5G6 932 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 ACTL7BQ9Y614 415 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 MAST4O15021 2626 aa9.16□□□□□ -0.94
NPLOC4-210ENST00000572824 NAV2Q8IVL1 2488 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 FLNCQ14315 2725 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 IGHV1OR21-1A0A087WYE8 117 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 A0A0J9YYE9 177 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 CFAP69A5D8W1 941 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 CAPN8A6NHC0 703 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 EIF3CLB5ME19 914 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 KCNK1O00180 336 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 TNFRSF10CO14798 259 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 GPR39O43194 453 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 BPNT1O95861 308 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 TRBC1P01850 177 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 HOXC4P09017 264 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 SPTBP11277 2137 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 CASP14P31944 242 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 CA5AP35218 305 aa9.15□□□□□ -0.94
NPLOC4-210ENST00000572824 NOP2P46087 812 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms