RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MPOP05164 745 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 FGF1P05230 155 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 IVLP07476 585 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 PNLIPP16233 465 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 PECAM1P16284 738 aaPredicted RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 PTPN3P26045 913 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 AK4P27144 223 aaPredicted RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 DNAJA1P31689 397 aaKnown RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 ADCY8P40145 1251 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 EIF2S3P41091 472 aaKnown RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 SPINT3P49223 89 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 GABREP78334 506 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 CCL7P80098 99 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ADCY2Q08462 1091 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ILF3Q12906 894 aaKnown RBP eCLIP7.38□□□□□ -1.23
NUP88-205ENST00000572809 PEX6Q13608 980 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 SPIDRQ14159 915 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 GALNT3Q14435 633 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 PRKD1Q15139 912 aaPredicted RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 SLC14A2Q15849 920 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 COL28A1Q2UY09 1125 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 C14orf28Q4W4Y0 310 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 C11orf63Q6NUN7 778 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 DOK6Q6PKX4 331 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 PID1Q7Z2X4 250 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ZC3H18Q86VM9 953 aaKnown RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 SFTPA2Q8IWL1 248 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 Q8N9G6 341 aaPredicted RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 SPATA22Q8NHS9 363 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 KIAA1524Q8TCG1 905 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 TADA1Q96BN2 335 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ATXN7L3BQ96GX2 97 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 RBM41Q96IZ5 413 aaKnown RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 ZNF578Q96N58 590 aaPredicted RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 GFM1Q96RP9 751 aaKnown RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 TRIB3Q96RU7 358 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 WDR24Q96S15 920 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 HEMGNQ9BXL5 484 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 LRRN3Q9H3W5 708 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 SUDS3Q9H7L9 328 aaPredicted RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 SYNDIG1Q9H7V2 258 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 POLR1BQ9H9Y6 1135 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 MAGEE1Q9HCI5 957 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 TAAR2Q9P1P5 351 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ZNHIT2Q9UHR6 403 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 APPL1Q9UKG1 709 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 RALYQ9UKM9 306 aaKnown RBP7.38□□□□□ -1.23
NUP88-205ENST00000572809 PCDHA3Q9Y5H8 950 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ENTPD2Q9Y5L3 495 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ASPMQ8IZT6 3477 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 SPEGQ15772 3267 aa7.38□□□□□ -1.23
NUP88-205ENST00000572809 ASXL3Q9C0F0 2248 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 A0A1W2PQM1 296 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 BTNL10A8MVZ5 291 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 HACD1B0YJ81 288 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 C9orf172C9J069 976 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 TMX2-CTNND1H3BSU7 103 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 PJA2O43164 708 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 NUDT21O43809 227 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 PMPCBO75439 489 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 ECEL1O95672 775 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 NDST3O95803 873 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 MT-CYBP00156 380 aaPredicted RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 ATP1A1P05023 1023 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 RPLP0P05388 317 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 PIRTP0C851 137 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 RBMS1P29558 406 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 CD68P34810 354 aaPredicted RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 CTNNA1P35221 906 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 CETN2P41208 172 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 MARCKSL1P49006 195 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 VAV2P52735 878 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 ERVPABLB-1P60509 514 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 WASHC5Q12768 1159 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 BIRC2Q13490 618 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 HLTFQ14527 1009 aaKnown RBP eCLIP7.37□□□□□ -1.23
NUP88-205ENST00000572809 PPP2R5EQ16537 467 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 TBC1D25Q3MII6 688 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 PYCR3Q53H96 274 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 C3orf38Q5JPI3 329 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 CERCAMQ5T4B2 595 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 HENMT1Q5T8I9 393 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 CCDC181Q5TID7 509 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 SLC30A9Q6PML9 568 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 RAD9BQ6WBX8 426 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 MARK2Q7KZI7 788 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 TMC3Q7Z5M5 1100 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 TRIM74Q86UV6 250 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 C17orf82Q86X59 251 aaPredicted RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 WDR36Q8NI36 951 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 HTR3CQ8WXA8 447 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 KRT35Q92764 455 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 HAUS1Q96CS2 278 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 EID2BQ96D98 161 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 COX14Q96I36 57 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 SLC46A1Q96NT5 459 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 FCRL5Q96RD9 977 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 SRPK1Q96SB4 655 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 VAT1Q99536 393 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 BAG1Q99933 345 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms