RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 BEND5Q7L4P6 421 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 SETD3Q86TU7 594 aaPredicted RBP6.31□□□□□ -1.4
PRPF8-204ENST00000572445 TTC7BQ86TV6 843 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 DNAAF5Q86Y56 855 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 KRT78Q8N1N4 520 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.31□□□□□ -1.4
PRPF8-204ENST00000572445 PCDH20Q8N6Y1 951 aaKnown RBP6.31□□□□□ -1.4
PRPF8-204ENST00000572445 MSANTD4Q8NCY6 345 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 TMIEQ8NEW7 156 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 TSPEARQ8WU66 669 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 FAM172AQ8WUF8 416 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 RXFP2Q8WXD0 754 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 RFFLQ8WZ73 363 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 EXTL1Q92935 676 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 FAM131CQ96AQ9 280 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 TBC1D31Q96DN5 1066 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 HMCESQ96FZ2 354 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 FEM1CQ96JP0 617 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 GDAP1L1Q96MZ0 367 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 ZNF578Q96N58 590 aaPredicted RBP6.31□□□□□ -1.4
PRPF8-204ENST00000572445 GFM1Q96RP9 751 aaKnown RBP6.31□□□□□ -1.4
PRPF8-204ENST00000572445 CEP41Q9BYV8 373 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 CLPBQ9H078 707 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 POFUT1Q9H488 388 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 MRPL40Q9NQ50 206 aaKnown RBP6.31□□□□□ -1.4
PRPF8-204ENST00000572445 SPASTQ9UBP0 616 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 KLQ9UEF7 1012 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 PADI4Q9UM07 663 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 HPCAL4Q9UM19 191 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 PAXBP1Q9Y5B6 917 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 NAV2Q8IVL1 2488 aa6.31□□□□□ -1.4
PRPF8-204ENST00000572445 HECTD1Q9ULT8 2610 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 ILVBLA1L0T0 632 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 PRSS38A1L453 326 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 CFAP69A5D8W1 941 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 FAM90A27PA6NNH2 459 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 TMCO5BA8MYB1 307 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 C10orf142B7Z368 130 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 D6RAR5 112 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 F8VZ95 297 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 DFFAO00273 331 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 KPNA5O15131 536 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 EPHB6O15197 1021 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 TEX33O43247 280 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 TM7SF2O76062 418 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 IGSF6O95976 241 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 C6P13671 934 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 EPHB2P29323 1055 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 SLC5A2P31639 672 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 AGFG1P52594 562 aaKnown RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 MAZP56270 477 aaKnown RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 POLR2FP61218 127 aaKnown RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 SNRPD1P62314 119 aaKnown RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 NOMO3P69849 1222 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 CCL7P80098 99 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 EIF4EBP2Q13542 120 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 ALG11Q2TAA5 492 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 MUM1Q2TAK8 710 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 C3orf36Q3SXR2 165 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 VWA3BQ502W6 1294 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 ZNF805Q5CZA5 627 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 MIIPQ5JXC2 388 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 CDKAL1Q5VV42 579 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 MBNL2Q5VZF2 373 aaKnown RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 GDPD4Q6W3E5 623 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 ZFAND4Q86XD8 727 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 ZNF761Q86XN6 746 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 MYLK4Q86YV6 388 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 IRF2BP1Q8IU81 584 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 LYSMD2Q8IV50 215 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 ZZZ3Q8IYH5 903 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 FAM71AQ8IYT1 594 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 FBXO39Q8N4B4 442 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 ZNF397Q8NF99 534 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 OR2AP1Q8NGE2 309 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 CCL4L1Q8NHW4 92 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 FNIP1Q8TF40 1166 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 ARHGEF2Q92974 986 aaKnown RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 UTP4Q969X6 686 aaKnown RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 HIC2Q96JB3 615 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 MCEEQ96PE7 176 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 KLF6Q99612 283 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 TUBGCP2Q9BSJ2 902 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 SELENOOQ9BVL4 669 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 VPS16Q9H269 839 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 NDST4Q9H3R1 872 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 EPB41L1Q9H4G0 881 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 RDH14Q9HBH5 336 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 SAMSN1Q9NSI8 373 aaKnown RBP6.3□□□□□ -1.4
PRPF8-204ENST00000572445 FOXJ2Q9P0K8 574 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 OR12D3Q9UGF7 316 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 TMPRSS11EQ9UL52 423 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 GPR52Q9Y2T5 361 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 LOXL2Q9Y4K0 774 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 ATP23Q9Y6H3 246 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 X6R8D5 127 aa6.3□□□□□ -1.4
PRPF8-204ENST00000572445 CCDC187A0A096LP49 1063 aa6.29□□□□□ -1.4
PRPF8-204ENST00000572445 PRAMEF33A0A0G2JMD5 474 aa6.29□□□□□ -1.4
PRPF8-204ENST00000572445 A0A0U1RQS6 177 aa6.29□□□□□ -1.4
PRPF8-204ENST00000572445 CCDC154A6NI56 674 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms