RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 HTR3CQ8WXA8 447 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 KRT35Q92764 455 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 NKD1Q969G9 470 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 RBM41Q96IZ5 413 aaKnown RBP17.08■□□□□ 0.32
LITAF-211ENST00000572255 MRGPRX2Q96LB1 330 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 FCRL5Q96RD9 977 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 VAT1Q99536 393 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 TIMM29Q9BSF4 260 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 EPB41L1Q9H4G0 881 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 TRABDQ9H4I3 376 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 LUC7LQ9NQ29 371 aaKnown RBP17.08■□□□□ 0.32
LITAF-211ENST00000572255 SCHIP1Q9P0W5 487 aaPredicted RBP17.08■□□□□ 0.32
LITAF-211ENST00000572255 DNAJC16Q9Y2G8 782 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.08■□□□□ 0.32
LITAF-211ENST00000572255 PRR19A6NJB7 356 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 HACD1B0YJ81 288 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 CDK14O94921 469 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 ITGB2P05107 769 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 XRCC1P18887 633 aaPredicted RBP17.07■□□□□ 0.32
LITAF-211ENST00000572255 UGT1A3P35503 534 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 CYLC1P35663 651 aaPredicted RBP17.07■□□□□ 0.32
LITAF-211ENST00000572255 PPP2R5EQ16537 467 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 LINC00303Q3SY05 128 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 DCAF12Q5T6F0 453 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 ANKS6Q68DC2 871 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 BBS12Q6ZW61 710 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 DAAM2Q86T65 1068 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 ZNF547Q8IVP9 402 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 IPMKQ8NFU5 416 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 EXTL1Q92935 676 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 HEMGNQ9BXL5 484 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 UCK1Q9HA47 277 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 IL26Q9NPH9 171 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 HACD3Q9P035 362 aa17.07■□□□□ 0.32
LITAF-211ENST00000572255 PDZK1P1A8MUH7 402 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 VIPP01282 170 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 HLA-DPA1P20036 260 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 SLC19A1P41440 591 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 MC2RQ01718 297 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 MPP3Q13368 585 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 SLC1A5Q15758 541 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 SEPT7Q16181 437 aaKnown RBP17.06■□□□□ 0.32
LITAF-211ENST00000572255 TMEM26Q6ZUK4 368 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 TRIM48Q8IWZ4 208 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 EXD3Q8N9H8 876 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 GDAP1Q8TB36 358 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 BLOC1S5Q8TDH9 187 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 TEFMQ96QE5 360 aaKnown RBP17.06■□□□□ 0.32
LITAF-211ENST00000572255 IL17CQ9P0M4 197 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 ZNF624Q9P2J8 865 aaPredicted RBP17.06■□□□□ 0.32
LITAF-211ENST00000572255 KLHL3Q9UH77 587 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 RSPH14Q9UHP6 348 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 TRHDEQ9UKU6 1024 aa17.06■□□□□ 0.32
LITAF-211ENST00000572255 TLN1Q9Y490 2541 aaKnown RBP17.06■□□□□ 0.32
LITAF-211ENST00000572255 MN1Q10571 1320 aaPredicted RBP17.05■□□□□ 0.32
LITAF-211ENST00000572255 B8ZZF3 427 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 H7C0C1 242 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 APOC4-APOC2K7ER74 178 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 RAD1O60671 282 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 APOC2P02655 101 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 SPAM1P38567 509 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 ATP5OP48047 213 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 CYP4F2P78329 520 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 TMEM115Q12893 351 aaPredicted RBP17.05■□□□□ 0.32
LITAF-211ENST00000572255 XRCC4Q13426 336 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 GTF2H3Q13889 308 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 ZDHHC20Q5W0Z9 365 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 ABRAXAS1Q6UWZ7 409 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 XKR5Q6UX68 686 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 GLT6D1Q7Z4J2 308 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 C11orf96Q7Z7L8 435 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 PLXDC1Q8IUK5 500 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 TRAPPC5Q8IUR0 188 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 CACNA2D3Q8IZS8 1091 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 IL22RA1Q8N6P7 574 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 DTX3LQ8TDB6 740 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 RTP4Q96DX8 246 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 CTRCQ99895 268 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 ARHGAP9Q9BRR9 750 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 FBXO8Q9NRD0 319 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 OGFRQ9NZT2 677 aa17.05■□□□□ 0.32
LITAF-211ENST00000572255 ZNF106Q9H2Y7 1883 aaKnown RBP17.04■□□□□ 0.32
LITAF-211ENST00000572255 RCCD1A6NED2 376 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 BUD23O43709 281 aaKnown RBP17.04■□□□□ 0.32
LITAF-211ENST00000572255 UGT1A9O60656 530 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 UBXN7O94888 489 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 BRAFP15056 766 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 TYRP1P17643 537 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 VCLP18206 1134 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 UGT1A6P19224 532 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 IDSP22304 550 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 UGT1A1P22309 533 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 UGT1A4P22310 534 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 RPL10P27635 214 aaKnown RBP17.04■□□□□ 0.32
LITAF-211ENST00000572255 RBL1P28749 1068 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 CTNNA1P35221 906 aaKnown RBP17.04■□□□□ 0.32
LITAF-211ENST00000572255 GFERP55789 205 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 COPS2P61201 443 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 CHRNA6Q15825 494 aa17.04■□□□□ 0.32
LITAF-211ENST00000572255 TBR1Q16650 682 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms