RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ZNF181Q2M3W8 571 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 ANKRD34AQ69YU3 496 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 HID1Q8IV36 788 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 HS3ST5Q8IZT8 346 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 SVOPQ8N4V2 548 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 EXT2Q93063 718 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 BRINP2Q9C0B6 783 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 CARS2Q9HA77 564 aaKnown RBP16.67■□□□□ 0.26
LITAF-209ENST00000571688 AS3MTQ9HBK9 375 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 ENTPD7Q9NQZ7 604 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 DNAJB9Q9UBS3 223 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 OSGIN1Q9UJX0 560 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 BRCA1P38398 1863 aaKnown RBP16.67■□□□□ 0.26
LITAF-209ENST00000571688 CENPBD1B2RD01 187 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 TSPAN1O60635 241 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 POLR2JP52435 117 aaKnown RBP16.67■□□□□ 0.26
LITAF-209ENST00000571688 GEMP55040 296 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 FPGSQ05932 587 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 SYT6Q5T7P8 510 aaPredicted RBP16.67■□□□□ 0.26
LITAF-209ENST00000571688 AGMOQ6ZNB7 445 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 ARHGAP36Q6ZRI8 547 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 FKBP9P1Q75LS8 142 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 RALGPS2Q86X27 583 aaPredicted RBP16.67■□□□□ 0.26
LITAF-209ENST00000571688 RAVER1Q8IY67 606 aaKnown RBP16.67■□□□□ 0.26
LITAF-209ENST00000571688 SVOPLQ8N434 492 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 PNPLA1Q8N8W4 532 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 AGBL3Q8NEM8 1001 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 DUSP16Q9BY84 665 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 CEP44Q9C0F1 390 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 COMMD8Q9NX08 183 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 TIMM22Q9Y584 194 aa16.67■□□□□ 0.26
LITAF-209ENST00000571688 SYCE1LA8MT33 242 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 XPNPEP2O43895 674 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 SLC22A3O75751 556 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 BEST1O76090 585 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 CDK5R2Q13319 367 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 ZBTB6Q15916 424 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 CELF3Q5SZQ8 465 aaKnown RBP16.66■□□□□ 0.26
LITAF-209ENST00000571688 KIAA0319Q5VV43 1072 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 STEAP3Q658P3 488 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 RNF19BQ6ZMZ0 732 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 GALNT7Q86SF2 657 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 HEATR4Q86WZ0 1026 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 DCP2Q8IU60 420 aaKnown RBP16.66■□□□□ 0.26
LITAF-209ENST00000571688 POC5Q8NA72 575 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 MCOLN3Q8TDD5 553 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 C18orf25Q96B23 403 aaPredicted RBP16.66■□□□□ 0.26
LITAF-209ENST00000571688 REXO5Q96IC2 774 aaKnown RBP16.66■□□□□ 0.26
LITAF-209ENST00000571688 EMILIN2Q9BXX0 1053 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 EXD2Q9NVH0 621 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 PCDHGA10Q9Y5H3 936 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 FAM172BPA6NC97 362 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 CNTN5O94779 1100 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 CD1DP15813 335 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 SPNP16150 400 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 POLR2EP19388 210 aaKnown RBP16.66■□□□□ 0.26
LITAF-209ENST00000571688 GGT1P19440 569 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 CXCR2P25025 360 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 MAP2K4P45985 399 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 SLC26A2P50443 739 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 COPZ1P61923 177 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.66■□□□□ 0.26
LITAF-209ENST00000571688 TAS2R42Q7RTR8 314 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 PIM3Q86V86 326 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 SH3RF2Q8TEC5 729 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 FAM49AQ9H0Q0 323 aaPredicted RBP16.66■□□□□ 0.26
LITAF-209ENST00000571688 A0A1B0GTL3 188 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 SAGE2PA6NJ88 616 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 DLGAP3O95886 979 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 PTTG1O95997 202 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 CCNCP24863 283 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 IL12AP29459 219 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 IL18R1Q13478 541 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 SELPLGQ14242 412 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 SMUG1Q53HV7 270 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 VARS2Q5ST30 1063 aaKnown RBP16.66■□□□□ 0.26
LITAF-209ENST00000571688 C9orf57Q5W0N0 161 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 TUBA3EQ6PEY2 450 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 RANBP10Q6VN20 620 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 RAB44Q7Z6P3 723 aaPredicted RBP16.66■□□□□ 0.26
LITAF-209ENST00000571688 FAM86B1Q8N7N1 296 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 KIAA1958Q8N8K9 716 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 OR52K2Q8NGK3 314 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 CNIH3Q8TBE1 160 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 KCTD13Q8WZ19 329 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 SMPD4Q9NXE4 827 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 ERVK-18Q9QC07 812 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 C3orf18Q9UK00 162 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 SPO11Q9Y5K1 396 aa16.66■□□□□ 0.26
LITAF-209ENST00000571688 MN1Q10571 1320 aaPredicted RBP16.65■□□□□ 0.26
LITAF-209ENST00000571688 TAF4O00268 1085 aa16.65■□□□□ 0.26
LITAF-209ENST00000571688 TNPO2O14787 897 aaKnown RBP16.65■□□□□ 0.26
LITAF-209ENST00000571688 SLC16A6O15403 523 aa16.65■□□□□ 0.26
LITAF-209ENST00000571688 CST1P01037 141 aa16.65■□□□□ 0.26
LITAF-209ENST00000571688 MTHFD2P13995 350 aa16.65■□□□□ 0.26
LITAF-209ENST00000571688 ZNF135P52742 658 aaPredicted RBP16.65■□□□□ 0.26
LITAF-209ENST00000571688 VAC14Q08AM6 782 aa16.65■□□□□ 0.26
LITAF-209ENST00000571688 NKG7Q16617 165 aa16.65■□□□□ 0.26
LITAF-209ENST00000571688 FAM209AQ5JX71 171 aa16.65■□□□□ 0.26
LITAF-209ENST00000571688 CILP2Q8IUL8 1156 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms