RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ANXA6P08133 673 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 CKMT1AP12532 417 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 CKMT2P17540 419 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 ACP1P24666 158 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 ADRA1DP25100 572 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 ACTR1BP42025 376 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 PAFAH1B1P43034 410 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 RPL21P46778 160 aaKnown RBP6.89□□□□□ -1.31
SMG6-209ENST00000571442 BLKP51451 505 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 ACTR1AP61163 376 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 DR1Q01658 176 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 FOXC1Q12948 553 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 HLTFQ14527 1009 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMG6-209ENST00000571442 ELOCQ15369 112 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 PPP1R7Q15435 360 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 DBN1Q16643 649 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 ZNF658BQ4V348 819 aaPredicted RBP6.89□□□□□ -1.31
SMG6-209ENST00000571442 ZRANB3Q5FWF4 1079 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 PCID2Q5JVF3 399 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 IZUMO3Q5VZ72 239 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 ZCCHC8Q6NZY4 707 aaKnown RBP6.89□□□□□ -1.31
SMG6-209ENST00000571442 OGFOD3Q6PK18 319 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 TMEM220Q6QAJ8 160 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 DHRS13Q6UX07 377 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 C4orf22Q6V702 233 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 ZNF572Q7Z3I7 529 aaPredicted RBP6.89□□□□□ -1.31
SMG6-209ENST00000571442 SNX20Q7Z614 316 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 SERPINA9Q86WD7 417 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 C17orf82Q86X59 251 aaPredicted RBP6.89□□□□□ -1.31
SMG6-209ENST00000571442 GALNT13Q8IUC8 556 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 UNC5BQ8IZJ1 945 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 NXPE1Q8N323 547 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 FSTL5Q8N475 847 aaPredicted RBP6.89□□□□□ -1.31
SMG6-209ENST00000571442 CHCHD4Q8N4Q1 142 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 LRRN4CLQ8ND94 238 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 MCUQ8NE86 351 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 FAM46DQ8NEK8 389 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 GDAP1Q8TB36 358 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 LKAAEAR1Q8TD35 194 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 GRK7Q8WTQ7 553 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 ZNF592Q92610 1267 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 SGF29Q96ES7 293 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 SIGLEC10Q96LC7 697 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 CDC6Q99741 560 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 KIFC1Q9BW19 673 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 TRIM31Q9BZY9 425 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 TBC1D29Q9UFV1 150 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 ASIC3Q9UHC3 531 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 CDC23Q9UJX2 597 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 KLK13Q9UKR3 277 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 SOX13Q9UN79 622 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 GPR34Q9UPC5 381 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 DNAJC16Q9Y2G8 782 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 WDR37Q9Y2I8 494 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 SNX24Q9Y343 169 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 KIF26BQ2KJY2 2108 aa6.89□□□□□ -1.31
SMG6-209ENST00000571442 ZCWPW2A0A1B0GU75 182 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 CPED1A4D0V7 1026 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 EME2A4GXA9 379 aaPredicted RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 FAM149AA5PLN7 773 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 NEMP2A6NFY4 417 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 CCDC188H7C350 402 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 PPM1DO15297 605 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 VEGFDO43915 354 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 PPFIA2O75334 1257 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 URI1O94763 535 aaPredicted RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 SEC31AO94979 1220 aaKnown RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 GAS8O95995 478 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 BRAFP15056 766 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ZNF7P17097 686 aaPredicted RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 ITGALP20701 1170 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ACRV1P26436 265 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 PBLDP30039 288 aaPredicted RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 HADHAP40939 763 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ARCN1P48444 511 aaKnown RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 NPY2RP49146 381 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ITGA8P53708 1063 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 SHC2P98077 582 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 DAB2P98082 770 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 CDK16Q00536 496 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 INSM1Q01101 510 aaPredicted RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 CACNG1Q06432 222 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 DHX9Q08211 1270 aaKnown RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 ITGA9Q13797 1035 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 NFE2L1Q14494 772 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 CLCA4Q14CN2 919 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 NR0B2Q15466 257 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 INAVAQ3KP66 663 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ZNF789Q5FWF6 425 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 HP1BP3Q5SSJ5 553 aaPredicted RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 LDLRAP1Q5SW96 308 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ZDHHC20Q5W0Z9 365 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 HIBCHQ6NVY1 386 aaPredicted RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 LVRNQ6Q4G3 990 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 NAPRTQ6XQN6 538 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 EFL1Q7Z2Z2 1120 aaKnown RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 TMPRSS9Q7Z410 1059 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 RAB44Q7Z6P3 723 aaPredicted RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 ZNF761Q86XN6 746 aaPredicted RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 GKN2Q86XP6 184 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms