RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 TXNDC5Q8NBS9 432 aaKnown RBP11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 POP5Q969H6 163 aaKnown RBP11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 HMCESQ96FZ2 354 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 HIPK3Q9H422 1215 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 EIF2B4Q9UI10 523 aaKnown RBP11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 SLC27A5Q9Y2P5 690 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 MAP1BP46821 2468 aaKnown RBP11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 J3QRK9 145 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 SNPHO15079 494 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 SORBS2O94875 1100 aaKnown RBP11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 HLA-DQB2P05538 268 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 CTPS1P17812 591 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 IL12AP29459 219 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 CRATP43155 626 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 SEPHS1P49903 392 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 PGGT1BP53609 377 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 YBEYP58557 167 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 GNA12Q03113 381 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 TUSC3Q13454 348 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 CHSY3Q70JA7 882 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 UBASH3BQ8TF42 649 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 FBXL8Q96CD0 374 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 IPPKQ9H8X2 491 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 CCDC162PA2VCL2 907 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 SDHDO14521 159 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 CD52P31358 61 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 PITX1P78337 314 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 DAG1Q14118 895 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 TRIP4Q15650 581 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 STARD8Q92502 1023 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 LRRC3Q9BY71 257 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 ACTR3BQ9P1U1 418 aa11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 PTBP2Q9UKA9 531 aaKnown RBP11.04□□□□□ -0.64
PCDHGA4-201ENST00000571252 BHMG1C9JSJ3 638 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 NRP1O14786 923 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 DENRO43583 198 aaKnown RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 RGS10O43665 173 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 ALDH4A1P30038 563 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 GALNT2Q10471 571 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 CAMK2GQ13555 558 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 CARTPTQ16568 116 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 NOMO2Q5JPE7 1267 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 STEAP4Q687X5 459 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 DENND1CQ8IV53 801 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 TRIM48Q8IWZ4 208 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 ENKURQ8TC29 256 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 MAPK15Q8TD08 544 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 RTP4Q96DX8 246 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 KIFC1Q9BW19 673 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 YIPF2Q9BWQ6 316 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 LRTM1Q9HBL6 345 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 PCDH12Q9NPG4 1184 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 SAMD4AQ9UPU9 718 aaKnown RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 RBMX2Q9Y388 322 aaKnown RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 RAP2AP10114 183 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 PBX3P40426 434 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 SLC16A1P53985 500 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 PARP15Q460N3 678 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 TRIQKQ629K1 86 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 PPP4R4Q6NUP7 873 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 P2RY8Q86VZ1 359 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 SCAMP5Q8TAC9 235 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 RNF39Q9H2S5 420 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 STMN3Q9NZ72 180 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 TRPC4Q9UBN4 977 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 TLL2Q9Y6L7 1015 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 UGT2B11O75310 529 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 ALDH1A2O94788 518 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 ALDH9A1P49189 494 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 CDC42P60953 191 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 SP3Q02447 781 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 NIPAL4Q0D2K0 466 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 TRIM32Q13049 653 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 EIF2B5Q13144 721 aaKnown RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 PABPC1LQ4VXU2 614 aaKnown RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 FAM151BQ6UXP7 276 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 NANOGNBQ7Z5D8 188 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 TMEM135Q86UB9 458 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 CENPIQ92674 756 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 NELL1Q92832 810 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 NUSAP1Q9BXS6 441 aaKnown RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 DNMT3LQ9UJW3 386 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 ZNF490Q9ULM2 529 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 MYL12BO14950 172 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 IRAK2O43187 625 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 NOBOXO60393 691 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 IGSF6O95976 241 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 HPCAL1P37235 193 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 HSPA7P48741 367 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 EEFSECP57772 596 aaKnown RBP11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 PPP1R3AQ16821 1122 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 DGKKQ5KSL6 1271 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 PAQR3Q6TCH7 311 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 CPNE9Q8IYJ1 553 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 TAMM41Q96BW9 452 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 ERLEC1Q96DZ1 483 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 VPS35Q96QK1 796 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 ACBD6Q9BR61 282 aa11.03□□□□□ -0.64
PCDHGA4-201ENST00000571252 NFKBIZQ9BYH8 718 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms