RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MYBPHQ13203 477 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 GPS2Q13227 327 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 PNOCQ13519 176 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 KNOP1Q1ED39 458 aaKnown RBP6.8□□□□□ -1.32
CHD3-213ENST00000571249 FCRL6Q6DN72 434 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 ERAP2Q6P179 960 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 PNCKQ6P2M8 343 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 LEKR1Q6ZMV7 388 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 BEND5Q7L4P6 421 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 GALNT12Q8IXK2 581 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 CCDC116Q8IYX3 515 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 SIMC1Q8NDZ2 872 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 PPP4R1Q8TF05 950 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 CA5BP1Q8WTZ4 195 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 TFAP2BQ92481 460 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 SEMA4DQ92854 862 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 SH3KBP1Q96B97 665 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 SDCCAG3Q96C92 435 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 RMND5BQ96G75 393 aaPredicted RBP6.8□□□□□ -1.32
CHD3-213ENST00000571249 PAGE5Q96GU1 130 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 PWWP2AQ96N64 755 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 TGM7Q96PF1 710 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 CDK15Q96Q40 435 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 GSDMAQ96QA5 445 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 GPATCH1Q9BRR8 931 aaKnown RBP6.8□□□□□ -1.32
CHD3-213ENST00000571249 UCK2Q9BZX2 261 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 HSD3B7Q9H2F3 369 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 CUEDC2Q9H467 287 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 STN1Q9H668 368 aaKnown RBP6.8□□□□□ -1.32
CHD3-213ENST00000571249 MAGEF1Q9HAY2 307 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 POPDC2Q9HBU9 364 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 WASH6PQ9NQA3 447 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 DMAC2Q9NW81 257 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 DDIT4Q9NX09 232 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 KCNN3Q9UGI6 736 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 MAN1B1Q9UKM7 699 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 RARRES3Q9UL19 164 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 MEMO1Q9Y316 297 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 SPTBP11277 2137 aa6.8□□□□□ -1.32
CHD3-213ENST00000571249 ILVBLA1L0T0 632 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 TRIM49BA6NDI0 452 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 DRGXA6NNA5 263 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 M0QYV0 167 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 TOX3O15405 576 aaPredicted RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 SART1O43290 800 aaKnown RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 ATE1O95260 518 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 TYRP1P17643 537 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 MSX1P28360 303 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 OTX2P32243 289 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 TXLNAP40222 546 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 YWHAZP63104 245 aaKnown RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 CDK17Q00537 523 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 SRSF2Q01130 221 aaKnown RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 MYL5Q02045 173 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 RAD51Q06609 339 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 DMPKQ09013 629 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 TUBB3Q13509 450 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 TAF5Q15542 800 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 UGP2Q16851 508 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 PRAMEF17Q5VTA0 474 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 B3GNTL1Q67FW5 361 aaPredicted RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 TECPR1Q7Z6L1 1165 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 VWA5B2Q8N398 1253 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 AOPEPQ8N6M6 819 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 CLEC1AQ8NC01 280 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 GOLGA5Q8TBA6 731 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 ENOX1Q8TC92 643 aaKnown RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 ARHGEF2Q92974 986 aaKnown RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 SMARCE1Q969G3 411 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 FAXDC2Q96IV6 333 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 FER1L6-AS2Q96M78 137 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 FCRL4Q96PJ5 515 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 NDC1Q9BTX1 674 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 MENTQ9BUN1 341 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 MLPHQ9BV36 600 aaPredicted RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 TRIM62Q9BVG3 475 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 FRMD8Q9BZ67 464 aaPredicted RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 TRIM5Q9C035 493 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 TKTL2Q9H0I9 626 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 EPB41L1Q9H4G0 881 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 GPAMQ9HCL2 828 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 SARS2Q9NP81 518 aaKnown RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 SLC39A2Q9NP94 309 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 ST7Q9NRC1 585 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 PHPT1Q9NRX4 125 aaPredicted RBP6.79□□□□□ -1.32
CHD3-213ENST00000571249 PGPEP1Q9NXJ5 209 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 OGFRQ9NZT2 677 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 SEC14L3Q9UDX4 400 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 HRH3Q9Y5N1 445 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 ANKRD36A6QL64 1941 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 DOCK10Q96BY6 2186 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 HCFC1P51610 2035 aa6.79□□□□□ -1.32
CHD3-213ENST00000571249 FOXO6A8MYZ6 492 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 TGFBR3LH3BV60 316 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 BIN1O00499 593 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 INSIG1O15503 277 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 PIGNO95427 931 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 S1PR4O95977 384 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 TPOP07202 933 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 KLK3P07288 261 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms