RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 PRUNE1Q86TP1 453 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 RASGEF1CQ8N431 466 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 CCDC89Q8N998 374 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 GLIS1Q8NBF1 620 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 SLC37A2Q8TED4 501 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 ATXN7L3BQ96GX2 97 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 ZCCHC2Q9C0B9 1178 aaKnown RBP12.49□□□□□ -0.41
TVP23B-204ENST00000571018 ASB8Q9H765 288 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 POLR1BQ9H9Y6 1135 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 RAB6BQ9NRW1 208 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 HOMER3Q9NSC5 361 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 KLC4Q9NSK0 619 aa12.49□□□□□ -0.41
TVP23B-204ENST00000571018 TRBV23OR9-2A0A075B6M9 112 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 KIR2DS5A0A0G2JLQ3 304 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 A0A0G2JNG1 304 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 A0A1W2PNU3 283 aaPredicted RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 OR5K4A6NMS3 321 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 TMX2-CTNND1H3BSU7 103 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 H7C0S8 307 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 KIR2DS3K7RE56 304 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 SNX2O60749 519 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 KCNJ13O60928 360 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 MPOP05164 745 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 ZSCAN5DPP0CG00 497 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 SLC2A4P14672 509 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 PSMA3P25788 255 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 ALDH4A1P30038 563 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 CCKBRP32239 447 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 RPL22P35268 128 aaKnown RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 INHBCP55103 352 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 OR1D5P58170 312 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 ZFP36L1Q07352 338 aaKnown RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 CDH17Q12864 832 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 NFATC2Q13469 925 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 SQSTM1Q13501 440 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 POU6F1Q14863 301 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 KIR2DS5Q14953 304 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 CLPPQ16740 277 aaPredicted RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 C4orf22Q6V702 233 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 B3GNT8Q7Z7M8 397 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 TRAPPC5Q8IUR0 188 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 LSMEM2Q8N112 164 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 PRELID2Q8N945 189 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 RASGEF1AQ8N9B8 481 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 OR52K1Q8NGK4 314 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 STYXQ8WUJ0 223 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 PBKQ96KB5 322 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 TMEM74Q96NL1 305 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 SARS2Q9NP81 518 aaKnown RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 PRDM8Q9NQV8 689 aa12.48□□□□□ -0.41
TVP23B-204ENST00000571018 NLE1Q9NVX2 485 aaPredicted RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 TRMT1Q9NXH9 659 aaKnown RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 ATXN7L1Q9ULK2 861 aaPredicted RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 TTC7AQ9ULT0 858 aaPredicted RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 DNMT3AQ9Y6K1 912 aaPredicted RBP12.48□□□□□ -0.41
TVP23B-204ENST00000571018 RP1P56715 2156 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 CCDC187A0A096LP49 1063 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 MROH6A6NGR9 719 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 E7EVH7 732 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 BRINP1O60477 761 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 CPNE6O95741 557 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 VCLP18206 1134 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 ITGALP20701 1170 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 IDSP22304 550 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 MSNP26038 577 aaKnown RBP12.47□□□□□ -0.41
TVP23B-204ENST00000571018 CD1CP29017 333 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 KCNJ1P48048 391 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 LMAN1P49257 510 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 CTSCP53634 463 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 GABREP78334 506 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 TMPRSS15P98073 1019 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 HHEXQ03014 270 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 PLA2G4EQ3MJ16 856 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 GPR33Q49SQ1 333 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 C3orf38Q5JPI3 329 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 DMRTA1Q5VZB9 504 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 IGF2-ASQ6U949 168 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 ABRAXAS1Q6UWZ7 409 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 WASH2PQ6VEQ5 465 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 GSTA5Q7RTV2 222 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 TMPRSS9Q7Z410 1059 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 SNX20Q7Z614 316 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 SLC9B2Q86UD5 537 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 PIM3Q86V86 326 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 SLC35F6Q8N357 371 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 DNAAF3Q8N9W5 541 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 AVL9Q8NBF6 648 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 WDR36Q8NI36 951 aaKnown RBP12.47□□□□□ -0.41
TVP23B-204ENST00000571018 SH3KBP1Q96B97 665 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 ULK4Q96C45 1275 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 LIN37Q96GY3 246 aaPredicted RBP12.47□□□□□ -0.41
TVP23B-204ENST00000571018 CDKN2AIPNLQ96HQ2 116 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 ZNF514Q96K75 400 aaPredicted RBP12.47□□□□□ -0.41
TVP23B-204ENST00000571018 DNAJC1Q96KC8 554 aaKnown RBP12.47□□□□□ -0.41
TVP23B-204ENST00000571018 FOXP3Q9BZS1 431 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 OSGEPL1Q9H4B0 414 aa12.47□□□□□ -0.41
TVP23B-204ENST00000571018 STN1Q9H668 368 aaKnown RBP12.47□□□□□ -0.41
TVP23B-204ENST00000571018 CASS4Q9NQ75 786 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms