RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 NLNQ9BYT8 704 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 OSGEPL1Q9H4B0 414 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZBTB20Q9HC78 741 aaPredicted RBP10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 FGF21Q9NSA1 209 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 KLC4Q9NSK0 619 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 GPATCH2LQ9NWQ4 482 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 HOOK1Q9UJC3 728 aaKnown RBP10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 ADGRG1Q9Y653 693 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 SPG11Q96JI7 2443 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 FBN3Q75N90 2809 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 A0A1B0GTL3 188 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 EEF2KO00418 725 aaKnown RBP10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 BIN1O00499 593 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 PEX11BO96011 259 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 JCHAINP01591 159 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 KLK3P07288 261 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF8P17098 575 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 CHRNB2P17787 502 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 STC1P52823 247 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 MAXP61244 160 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 GPR18Q14330 331 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF235Q14590 738 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 CA9Q16790 459 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 PLEKHS1Q5SXH7 462 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 ARMC12Q5T9G4 340 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 PRAMEF17Q5VTA0 474 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 TMEM126BQ8IUX1 230 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 DSELQ8IZU8 1212 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 LRFN5Q96NI6 719 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 SELENOOQ9BVL4 669 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 NAA15Q9BXJ9 866 aaKnown RBP10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 CARD9Q9H257 536 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF552Q9H707 407 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 SLC40A1Q9NP59 571 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 ATXN10Q9UBB4 475 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 SLC23A2Q9UGH3 650 aa10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 NOCTQ9UK39 431 aaKnown RBP10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 KLF2Q9Y5W3 355 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-202ENST00000570380 ANKHD1Q8IWZ3 2542 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 A0A1B0GUH1 482 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 SIGLEC16A6NMB1 481 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 OR52A4PA6NMU1 304 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 MEN1O00255 615 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 FZD6O60353 706 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 STSP08842 583 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 EDN3P14138 238 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 BRAFP15056 766 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF30P17039 623 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 HOXB4P17483 251 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 ERCC2P18074 760 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 HSPA9P38646 679 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF143P52747 638 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 GSCP56915 257 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 GSDMDP57764 484 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 TUBB4BP68371 445 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 FMO1Q01740 532 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 TUBB2AQ13885 445 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 MYBPC3Q14896 1274 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 GPR19Q15760 415 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 SEPT7Q16181 437 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF648Q5T619 568 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 KLHDC7AQ5VTJ3 777 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 ABRAXAS1Q6UWZ7 409 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 SPOCD1Q6ZMY3 1216 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF295-AS1Q8N0V1 137 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 D2HGDHQ8N465 521 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 GRHL3Q8TE85 626 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 ITLN2Q8WWU7 325 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF501Q96CX3 271 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF599Q96NL3 588 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 MAP3K3Q99759 626 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 MGME1Q9BQP7 344 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 TUBB2BQ9BVA1 445 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 TRIM8Q9BZR9 551 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 ARFGAP3Q9NP61 516 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 FAM207AQ9NSI2 230 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 POT1Q9NUX5 634 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 CSAG2Q9Y5P2 127 aa10.23□□□□□ -0.77
CTDNEP1-202ENST00000570380 CACNA1CQ13936 2221 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF469Q96JG9 3925 aaPredicted RBP10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 ABCA2Q9BZC7 2435 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 A0A0J9YYE9 177 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 TCRBV5S1A1TA0A578 114 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 PDZK1P1A8MUH7 402 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 CLDN7O95471 211 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 TRBC1P01850 177 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 ALPPP05187 535 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 UNGP13051 313 aaPredicted RBP10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 RPL10P27635 214 aaKnown RBP10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 RORAP35398 523 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 KRTAP10-9P60411 292 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 RPL7AP62424 266 aaKnown RBP10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 CDR2Q01850 454 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 PLA2G4EQ3MJ16 856 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 HENMT1Q5T8I9 393 aaKnown RBP10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 CRTC3Q6UUV7 619 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 FAM198BQ6UWH4 519 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 RFX8Q6ZV50 586 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF677Q86XU0 584 aa10.22□□□□□ -0.77
CTDNEP1-202ENST00000570380 KMT5CQ86Y97 462 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms