RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 SPEF2Q9C093 1822 aa3.76□□□□□ -1.81
UBR1-211ENST00000569971 NUP188Q5SRE5 1749 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 ABCA3Q99758 1704 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 KCPQ6ZWJ8 1503 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 SH3TC1Q8TE82 1336 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 ZNF335Q9H4Z2 1342 aaPredicted RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 LINC01548A6NM66 108 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 A6NNC1 897 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 H3BQV1 296 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 MITFO75030 526 aaPredicted RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 JRKO75564 520 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 PSMD10O75832 226 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 MTA2O94776 668 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 RPN1P04843 607 aaKnown RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 ZFYP08048 801 aaPredicted RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 MMP3P08254 477 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 CBSLP0DN79 551 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 CHRNB1P11230 501 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 TRIM21P19474 475 aaKnown RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 ATP5F1P24539 256 aaPredicted RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 CBSP35520 551 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 AVPR1AP37288 418 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 CAPZA2P47755 286 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 LIG4P49917 911 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 HSPA2P54652 639 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 PROK1P58294 105 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 RPS13P62277 151 aaKnown RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 FAM27E3Q08E93 113 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 SLC10A2Q12908 348 aaPredicted RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 SOWAHCQ53LP3 525 aaPredicted RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 HSP90AB3PQ58FF7 597 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 ERMARDQ5T6L9 678 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 ASPHD1Q5U4P2 390 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 NCAPH2Q6IBW4 605 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 HEPHL1Q6MZM0 1159 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 ZSCAN25Q6NSZ9 544 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 ZNF793Q6ZN11 406 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 LINGO2Q7L985 606 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 PLPPR4Q7Z2D5 763 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 RNF168Q8IYW5 571 aaPredicted RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 RBFAQ8N0V3 343 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 GALNT16Q8N428 558 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 NECAB1Q8N987 351 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 TDRD5Q8NAT2 981 aaKnown RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 BEST2Q8NFU1 509 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 TMEM18Q96B42 140 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 MSI2Q96DH6 328 aaKnown RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 RRNAD1Q96FB5 475 aaKnown RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 SEPT5Q99719 369 aaPredicted RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 FAM118BQ9BPY3 351 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 FAM110AQ9BQ89 295 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 LLPHQ9BRT6 129 aaKnown RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 MSTO1Q9BUK6 570 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 QTRT1Q9BXR0 403 aaKnown RBP3.75□□□□□ -1.81
UBR1-211ENST00000569971 OSGEPL1Q9H4B0 414 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 DECR2Q9NUI1 292 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 TMEM184CQ9NVA4 438 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 WDR35Q9P2L0 1181 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 PLAGL1Q9UM63 463 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 ZNF609O15014 1411 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 TNS2Q63HR2 1409 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 GLI3P10071 1580 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 ABCC12Q96J65 1359 aa3.75□□□□□ -1.81
UBR1-211ENST00000569971 XIRP1Q702N8 1843 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 ELP1O95163 1332 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 NHSL1Q5SYE7 1610 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 A0A1B0GUL7 405 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 A0A1B0GVM2 712 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 SMIM35A0A1B0GVV1 85 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 TMEM202A6NGA9 273 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 URADA6NGE7 173 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 LRRC72A6NJI9 287 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 AKR1B15C9JRZ8 316 aaPredicted RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 RNF113AO15541 343 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 AVILO75366 819 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 GPC4O75487 556 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 LATS1O95835 1130 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 AFPP02771 609 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 PRKCGP05129 697 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 PCCAP05165 728 aaPredicted RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 TPM3P06753 285 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 MYZAPP0CAP1 466 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 CCDC192P0DO97 292 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 MMP9P14780 707 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 ANXA7P20073 488 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 HOXD9P28356 352 aaPredicted RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 EEF1DP29692 281 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 DCTDP32321 178 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 PPP3CCP48454 512 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 CDH12P55289 794 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 TAS2R40P59535 323 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 TIMM10P62072 90 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 HMGN5P82970 282 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 TFAP4Q01664 338 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 TJP1Q07157 1748 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 SRSF4Q08170 494 aaKnown RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 GRAPQ13588 217 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 LAMB3Q13751 1172 aa3.74□□□□□ -1.81
UBR1-211ENST00000569971 BAATQ14032 418 aaPredicted RBP3.74□□□□□ -1.81
UBR1-211ENST00000569971 DLG2Q15700 870 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms