RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 HAUS2Q9NVX0 235 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 AKAP7Q9P0M2 348 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 INTUQ9ULD6 942 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 WDR37Q9Y2I8 494 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 ALG6Q9Y672 507 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 PTPN13Q12923 2485 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 KIR2DS5A0A0G2JLQ3 304 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 A0A0G2JNG1 304 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 RCCD1A6NED2 376 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 LILRA5A6NI73 299 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 OR52A4PA6NMU1 304 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 KIR2DS3K7RE56 304 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 BUD23O43709 281 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 SPOPO43791 374 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 ZFXP17010 805 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 ZNF7P17097 686 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 TYRP1P17643 537 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 SLC1A1P43005 524 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 LEPRP48357 1165 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 EPHA4P54764 986 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 PPP1CAP62136 330 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 OLIG2Q13516 323 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 PTPRCAPQ14761 206 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 KIR2DS5Q14953 304 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 SEPT7Q16181 437 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 TMEM164Q5U3C3 297 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 TMEM26Q6ZUK4 368 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 SLC9B2Q86UD5 537 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 ZC3H18Q86VM9 953 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 PHYKPLQ8IUZ5 450 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 UNC5BQ8IZJ1 945 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 NAT14Q8WUY8 206 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 DPYSL5Q9BPU6 564 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 IL26Q9NPH9 171 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 LUC7LQ9NQ29 371 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 DDX56Q9NY93 547 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 IL17BQ9UHF5 180 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 PCDHB11Q9Y5F2 797 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 SPTBP11277 2137 aa13.63□□□□□ -0.23
GTF3C1-211ENST00000569653 LOC101059948A0A1B0GTJ6 334 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 ZW10O43264 779 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 PSTPIP1O43586 416 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 SLC28A2O43868 658 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 KIF1CO43896 1103 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 UGT1A9O60656 530 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 LCA5LO95447 670 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 C9P02748 559 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 ZNF28P17035 718 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 XRCC1P18887 633 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 UGT1A6P19224 532 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 UGT1A1P22309 533 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 UGT1A4P22310 534 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 RPL10P27635 214 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 CTSCP53634 463 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 DRG2P55039 364 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 CHRNA6Q15825 494 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 DCAF12Q5T6F0 453 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 PDPK2PQ6A1A2 396 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 FAM83HQ6ZRV2 1179 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 LRRTM4Q86VH4 590 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 CCDC170Q8IYT3 715 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 KATNAL2Q8IYT4 538 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 CACNA2D3Q8IZS8 1091 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 SLC25A41Q8N5S1 370 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 RASGEF1AQ8N9B8 481 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 GPR150Q8NGU9 434 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 TFB1MQ8WVM0 346 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 RSC1A1Q92681 617 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 QKIQ96PU8 341 aaKnown RBP eCLIP13.62□□□□□ -0.234e-7■■■■■ 27
GTF3C1-211ENST00000569653 VPS35Q96QK1 796 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 PANX2Q96RD6 677 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 TIMM29Q9BSF4 260 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 TRIM4Q9C037 500 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 ZMYND15Q9H091 742 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 UGT1A7Q9HAW7 530 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 UGT1A10Q9HAW8 530 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 UGT1A8Q9HAW9 530 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 IL17CQ9P0M4 197 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 TRIM10Q9UDY6 481 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 FAM153AQ9UHL3 310 aa13.62□□□□□ -0.23
GTF3C1-211ENST00000569653 CYSRT1A8MQ03 144 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 GPR89AB7ZAQ6 455 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 KMOO15229 486 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 NKX2-8O15522 239 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 CDK14O94921 469 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 DLGAP3O95886 979 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 GPR89BP0CG08 455 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 CYLC1P35663 651 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 HMGCLP35914 325 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 MAGEA1P43355 309 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 NR2C2P49116 596 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 SH3BP2P78314 561 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 SPA17Q15506 151 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 INSCQ1MX18 579 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 ATP1A1-AS1Q5TC04 95 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 ABRAXAS1Q6UWZ7 409 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 IL22RA1Q8N6P7 574 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 CCDC112Q8NEF3 446 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 SH3KBP1Q96B97 665 aa13.61□□□□□ -0.23
GTF3C1-211ENST00000569653 C9orf72Q96LT7 481 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms