RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SYTL2Q9HCH5 934 aa8.52□□□□□ -1.05
SMG1-216ENST00000569122 SLC40A1Q9NP59 571 aa8.52□□□□□ -1.05
SMG1-216ENST00000569122 KLC4Q9NSK0 619 aa8.52□□□□□ -1.05
SMG1-216ENST00000569122 PRKAB1Q9Y478 270 aa8.52□□□□□ -1.05
SMG1-216ENST00000569122 SLC30A1Q9Y6M5 507 aa8.52□□□□□ -1.05
SMG1-216ENST00000569122 ABCA2Q9BZC7 2435 aa8.52□□□□□ -1.05
SMG1-216ENST00000569122 HIVEP1P15822 2718 aa8.52□□□□□ -1.05
SMG1-216ENST00000569122 POLEQ07864 2286 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 UBA6A0AVT1 1052 aaPredicted RBP8.51□□□□□ -1.05
SMG1-216ENST00000569122 SIGLEC16A6NMB1 481 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 PDZK1P1A8MUH7 402 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 C9J4A7 227 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 KMOO15229 486 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 KIF1CO43896 1103 aaKnown RBP8.51□□□□□ -1.05
SMG1-216ENST00000569122 CYP1A1P04798 512 aaPredicted RBP8.51□□□□□ -1.05
SMG1-216ENST00000569122 ATP1A1P05023 1023 aaKnown RBP8.51□□□□□ -1.05
SMG1-216ENST00000569122 MMEP08473 750 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 HBQ1P09105 142 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 PNMA6AP0CW24 399 aaPredicted RBP8.51□□□□□ -1.05
SMG1-216ENST00000569122 CD1EP15812 388 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 AGXTP21549 392 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 IDSP22304 550 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 HALP42357 657 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 STC1P52823 247 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 CDR2Q01850 454 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 APBA1Q02410 837 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 SSPNQ14714 243 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 PLCL1Q15111 1095 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 AGAP9Q5VTM2 703 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 HGSNATQ68CP4 663 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 WDR59Q6PJI9 974 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 ABRAXAS1Q6UWZ7 409 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 RPTNQ6XPR3 784 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 NOP9Q86U38 636 aaKnown RBP8.51□□□□□ -1.05
SMG1-216ENST00000569122 PARP9Q8IXQ6 854 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 DSELQ8IZU8 1212 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 NXPE1Q8N323 547 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 GALNT16Q8N428 558 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 D2HGDHQ8N465 521 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 ZBTB2Q8N680 514 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 C3orf20Q8ND61 904 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 JOSD2Q8TAC2 188 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 FAR1Q8WVX9 515 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 PIH1D2Q8WWB5 315 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 RELTQ969Z4 430 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 CLIP3Q96DZ5 547 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 MGME1Q9BQP7 344 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 CNPY3Q9BT09 278 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 MLPHQ9BV36 600 aaPredicted RBP8.51□□□□□ -1.05
SMG1-216ENST00000569122 STK33Q9BYT3 514 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 FAM83DQ9H4H8 585 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 TRIM39Q9HCM9 518 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 SIX2Q9NPC8 291 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 ADAM22Q9P0K1 906 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 RWDD2AQ9UIY3 292 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 MTORP42345 2549 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 PDZD2O15018 2839 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
SMG1-216ENST00000569122 DOCK4Q8N1I0 1966 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 IGHV5-51A0A0C4DH38 117 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 A0A0J9YYE9 177 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 A0A1W2PQJ5 194 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 TLCD2A6NGC4 264 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 KCNJ13O60928 360 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 ZBTB11O95625 1053 aaPredicted RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 TRBC1P01850 177 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 EBLN1P0CF75 366 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 CTPS1P17812 591 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 ERCC2P18074 760 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 HTR1EP28566 365 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 HCAR3P49019 387 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 SOX8P57073 446 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 RPL26P61254 145 aaKnown RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 SLC10A7Q0GE19 358 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 TRAF2Q12933 501 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 GPS2Q13227 327 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 RAPSNQ13702 412 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 ATP1A4Q13733 1029 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 SYCP1Q15431 976 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 TESK1Q15569 626 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 MAN2A1Q16706 1144 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 INSCQ1MX18 579 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 ZNF630Q2M218 657 aaPredicted RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.5□□□□□ -1.056e-8■□□□□ 8.3
SMG1-216ENST00000569122 TDRD12Q587J7 1177 aaKnown RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 DNTTIP2Q5QJE6 756 aaKnown RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 PLEKHS1Q5SXH7 462 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 ZFYVE27Q5T4F4 411 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 MARC1Q5VT66 337 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 IRAK1BP1Q5VVH5 260 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 B3GNTL1Q67FW5 361 aaPredicted RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 BNC2Q6ZN30 1099 aaPredicted RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 RFX8Q6ZV50 586 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 FJX1Q86VR8 437 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 LRRC49Q8IUZ0 686 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 PSTKQ8IV42 348 aaKnown RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 ZNF808Q8N4W9 903 aaPredicted RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 EPS8L1Q8TE68 723 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 PPP4R1Q8TF05 950 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 RSC1A1Q92681 617 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms