RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PSMC2P35998 433 aaKnown RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 PGM1P36871 562 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 HADHAP40939 763 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 NLRP5P59047 1200 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 MC1RQ01726 317 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 SLC18A2Q05940 514 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 LTBQ06643 244 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 CRYZQ08257 329 aaKnown RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 TDGQ13569 410 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 ACVR2BQ13705 512 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 SLC18A3Q16572 532 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 PRICKLE4Q2TBC4 344 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 CCDC92Q53HC0 331 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 DNTTIP2Q5QJE6 756 aaKnown RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FAM69AQ5T7M9 428 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 OTUD1Q5VV17 481 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FKBP1CQ5VVH2 108 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FAM83HQ6ZRV2 1179 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 LRRC8DQ7L1W4 858 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 KRT74Q7RTS7 529 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 SZRD1Q7Z422 152 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 GPR142Q7Z601 462 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 CPLX4Q7Z7G2 160 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 VSIG1Q86XK7 387 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 RBFAQ8N0V3 343 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 ADSSL1Q8N142 457 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 IQCF1Q8N6M8 205 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 TRPV1Q8NER1 839 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 RASSF8Q8NHQ8 419 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 STAMQ92783 540 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 APOPT1Q96IL0 206 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FUZQ9BT04 418 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 NPLQ9BXD5 320 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 NPFFR1Q9GZQ6 430 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 SLC25A18Q9H1K4 315 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 EPHX3Q9H6B9 360 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 MVB12BQ9H7P6 319 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 TTC12Q9H892 705 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 EIF2B3Q9NR50 452 aaKnown RBP3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FBXO40Q9UH90 709 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 RPS6KA6Q9UK32 745 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 FZD10Q9ULW2 581 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 GDAQ9Y2T3 454 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZNF711Q9Y462 761 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 PSAT1Q9Y617 370 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 SCN5AQ14524 2016 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 PARP14Q460N5 1801 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 LRRC37A2A6NM11 1700 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 MROH5Q6ZUA9 1318 aa3.44□□□□□ -1.86
HMGB1P6-201ENST00000569046 PTPRSQ13332 1948 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 RPAP1Q9BWH6 1393 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 SH2D7A6NKC9 451 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 PEX12O00623 359 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 SLC25A17O43808 307 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 HBP1O60381 514 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 TSPAN3O60637 253 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 ERAL1O75616 437 aaKnown RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 IL1AP01583 271 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 LAMP2P13473 410 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 HOXB6P17509 224 aaKnown RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 EPHA8P29322 1005 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 DCTDP32321 178 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 BTDP43251 543 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 HARS2P49590 506 aaKnown RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 PDLIM4P50479 330 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 KRTAP10-9P60411 292 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 TIMM10P62072 90 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 RPP30P78346 268 aaKnown RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 IRX3P78415 501 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 TRAF3Q13114 568 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 RASA2Q15283 850 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 FSCBQ5H9T9 825 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 RBM23Q86U06 439 aaKnown RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 GALNT13Q8IUC8 556 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 SPATA2LQ8IUW3 424 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 DIS3L2Q8IYB7 885 aaKnown RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 GHDCQ8N2G8 530 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 GPRC5AQ8NFJ5 357 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 TMEM163Q8TC26 289 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 ELP5Q8TE02 316 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 TMEM18Q96B42 140 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 MSTO1Q9BUK6 570 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 MROH8Q9H579 483 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZHX1Q9UKY1 873 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 SNX8Q9Y5X2 465 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 CUL9Q8IWT3 2517 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 MCM3APO60318 1980 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 NAV1Q8NEY1 1877 aa3.43□□□□□ -1.86
HMGB1P6-201ENST00000569046 PTGES3LE9PB15 166 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 VWA5AO00534 786 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 ENTPD3O75355 529 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 CNMDO75829 334 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 WEE2P0C1S8 567 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 CSH1P0DML2 217 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 CSH2P0DML3 217 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 UBL4AP11441 157 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 MYOGP15173 224 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 CTPS1P17812 591 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms