RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 RTP4Q96DX8 246 aa18.63■□□□□ 0.57
SPSB3-210ENST00000568416 OXNAD1Q96HP4 312 aaPredicted RBP18.63■□□□□ 0.57
SPSB3-210ENST00000568416 MRGPRX2Q96LB1 330 aa18.63■□□□□ 0.57
SPSB3-210ENST00000568416 QKIQ96PU8 341 aaKnown RBP eCLIP18.63■□□□□ 0.57
SPSB3-210ENST00000568416 VAT1Q99536 393 aa18.63■□□□□ 0.57
SPSB3-210ENST00000568416 SLC12A9Q9BXP2 914 aa18.63■□□□□ 0.57
SPSB3-210ENST00000568416 FBXO8Q9NRD0 319 aa18.63■□□□□ 0.57
SPSB3-210ENST00000568416 OGFRQ9NZT2 677 aa18.63■□□□□ 0.57
SPSB3-210ENST00000568416 KLHL8Q9P2G9 620 aaPredicted RBP18.63■□□□□ 0.57
SPSB3-210ENST00000568416 ZNF624Q9P2J8 865 aaPredicted RBP18.63■□□□□ 0.57
SPSB3-210ENST00000568416 TFR2Q9UP52 801 aa18.63■□□□□ 0.57
SPSB3-210ENST00000568416 MN1Q10571 1320 aaPredicted RBP18.63■□□□□ 0.57
SPSB3-210ENST00000568416 J3QKU1 62 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 RAD1O60671 282 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 ZIC2O95409 532 aaPredicted RBP18.62■□□□□ 0.57
SPSB3-210ENST00000568416 BRAFP15056 766 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 CHRNA4P43681 627 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 C11orf63Q6NUN7 778 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 ABRAXAS1Q6UWZ7 409 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 TMEM26Q6ZUK4 368 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 PID1Q7Z2X4 250 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 C11orf96Q7Z7L8 435 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 CCDC170Q8IYT3 715 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 CACNA2D3Q8IZS8 1091 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 IL22RA1Q8N6P7 574 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 HAUS1Q96CS2 278 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 CTRCQ99895 268 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 ARHGAP9Q9BRR9 750 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 IL26Q9NPH9 171 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 HACD3Q9P035 362 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 IL17CQ9P0M4 197 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 KLHL3Q9UH77 587 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 PILRAQ9UKJ1 303 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 DNAJC16Q9Y2G8 782 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 PCDHA13Q9Y5I0 950 aa18.62■□□□□ 0.57
SPSB3-210ENST00000568416 PDZK1P1A8MUH7 402 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 HACD1B0YJ81 288 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 VIPP01282 170 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 C9P02748 559 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 ANKRD34CP0C6C1 535 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 LIFP15018 202 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 TMEM115Q12893 351 aaPredicted RBP18.61■□□□□ 0.57
SPSB3-210ENST00000568416 SLC1A5Q15758 541 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 PPP2R5EQ16537 467 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 AGAP9Q5VTM2 703 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 WASH2PQ6VEQ5 465 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 BBS12Q6ZW61 710 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 PLXDC1Q8IUK5 500 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 SLC25A41Q8N5S1 370 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 KRT35Q92764 455 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 RBM41Q96IZ5 413 aaKnown RBP18.61■□□□□ 0.57
SPSB3-210ENST00000568416 ZPBPQ9BS86 351 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 TRIM5Q9C035 493 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 APMAPQ9HDC9 416 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 WASH6PQ9NQA3 447 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 POT1Q9NUX5 634 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 SLC30A1Q9Y6M5 507 aa18.61■□□□□ 0.57
SPSB3-210ENST00000568416 F5H423 210 aaPredicted RBP18.6■□□□□ 0.57
SPSB3-210ENST00000568416 ITGB6P18564 788 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 HLA-DPA1P20036 260 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 IDSP22304 550 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 SPAM1P38567 509 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 GFERP55789 205 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 MPP3Q13368 585 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 XRCC4Q13426 336 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 SEPT7Q16181 437 aaKnown RBP18.6■□□□□ 0.57
SPSB3-210ENST00000568416 ZDHHC20Q5W0Z9 365 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 CEACAM20Q6UY09 585 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 CCDC50Q8IVM0 306 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 TRIM48Q8IWZ4 208 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 IPMKQ8NFU5 416 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 BRSK1Q8TDC3 778 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 C9orf72Q96LT7 481 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 SIDT1Q9NXL6 827 aaKnown RBP18.6■□□□□ 0.57
SPSB3-210ENST00000568416 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.6■□□□□ 0.57
SPSB3-210ENST00000568416 TRHDEQ9UKU6 1024 aa18.6■□□□□ 0.57
SPSB3-210ENST00000568416 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.6■□□□□ 0.57
SPSB3-210ENST00000568416 TMEM184BQ9Y519 407 aaPredicted RBP18.6■□□□□ 0.57
SPSB3-210ENST00000568416 ATMQ13315 3056 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 KALRNO60229 2985 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 APOC4-APOC2K7ER74 178 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 UBXN7O94888 489 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 APOC2P02655 101 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 FAM87AP0C7U9 286 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 RPL10P27635 214 aaKnown RBP18.59■□□□□ 0.57
SPSB3-210ENST00000568416 CA5AP35218 305 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 TNNT3P45378 269 aaPredicted RBP18.59■□□□□ 0.57
SPSB3-210ENST00000568416 DRG2P55039 364 aaKnown RBP18.59■□□□□ 0.57
SPSB3-210ENST00000568416 GTF2H3Q13889 308 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 SPA17Q15506 151 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 CHRNA6Q15825 494 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 TIPARPQ7Z3E1 657 aaKnown RBP18.59■□□□□ 0.57
SPSB3-210ENST00000568416 GLT6D1Q7Z4J2 308 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 TRAPPC5Q8IUR0 188 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 NLGN4XQ8N0W4 816 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 NLGN4YQ8NFZ3 816 aaPredicted RBP18.59■□□□□ 0.57
SPSB3-210ENST00000568416 GDAP1Q8TB36 358 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 BLOC1S5Q8TDH9 187 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 HEMGNQ9BXL5 484 aa18.59■□□□□ 0.57
SPSB3-210ENST00000568416 SLC40A1Q9NP59 571 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms