RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ZNF658BQ4V348 819 aaPredicted RBP8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 ZNF648Q5T619 568 aaPredicted RBP8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 ALS2CLQ60I27 953 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 XKR5Q6UX68 686 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 C4orf22Q6V702 233 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 ZNF574Q6ZN55 896 aaPredicted RBP8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 ARHGEF18Q6ZSZ5 1173 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 CHST15Q7LFX5 561 aaPredicted RBP8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 TMPRSS9Q7Z410 1059 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 B3GNT8Q7Z7M8 397 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 LINC00523Q86TU6 105 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 LRRTM4Q86VH4 590 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 RASGEF1AQ8N9B8 481 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 AVL9Q8NBF6 648 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 WDR36Q8NI36 951 aaKnown RBP8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 ZNF398Q8TD17 642 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 SLC37A2Q8TED4 501 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 MAIP1Q8WWC4 291 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 PATE1Q8WXA2 126 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 ATG4AQ8WYN0 398 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 FGF11Q92914 225 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 PEX13Q92968 403 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 ATXN7L3BQ96GX2 97 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 SGSM3Q96HU1 749 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 TMEM74Q96NL1 305 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 RANBP9Q96S59 729 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 UGT1A7Q9HAW7 530 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 UGT1A10Q9HAW8 530 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 UGT1A8Q9HAW9 530 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 ETNK1Q9HBU6 452 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 HOMER3Q9NSC5 361 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 NLE1Q9NVX2 485 aaPredicted RBP8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 PRKAB1Q9Y478 270 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 JRKLQ9Y4A0 524 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 KCTD3Q9Y597 815 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 SEC16AO15027 2179 aa8.07□□□□□ -1.12
HDGFL3-205ENST00000568129 GOLGA6L3A6NEY3 463 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 LILRA5A6NI73 299 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 F5H423 210 aaPredicted RBP8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 CES2O00748 559 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 HGSO14964 777 aaPredicted RBP8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 ACP5P13686 325 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 BRAFP15056 766 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 ACTN2P35609 894 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 LIMK2P53671 638 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 EPHA4P54764 986 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 OR1D5P58170 312 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 ACVR1Q04771 509 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 TRA2AQ13595 282 aaKnown RBP eCLIP8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 SPARCL1Q14515 664 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 PTPRCAPQ14761 206 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 TCEA2Q15560 299 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 CYP1B1Q16678 543 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 GPR33Q49SQ1 333 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 GPRC6AQ5T6X5 926 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 ARMC3Q5W041 872 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 METRNLQ641Q3 311 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 WDR74Q6RFH5 385 aaPredicted RBP8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 MARK2Q7KZI7 788 aaKnown RBP8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 SNX20Q7Z614 316 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 SLC9B2Q86UD5 537 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 PIM3Q86V86 326 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 GLIS1Q8NBF1 620 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 OR4D9Q8NGE8 314 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 STYXQ8WUJ0 223 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 C1orf54Q8WWF1 131 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 SH3KBP1Q96B97 665 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 LRRC45Q96CN5 670 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 CDKN2AIPNLQ96HQ2 116 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 ZNF514Q96K75 400 aaPredicted RBP8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 PBKQ96KB5 322 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 APOL2Q9BQE5 337 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 KCNF1Q9H3M0 494 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 EPB41L1Q9H4G0 881 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 ARFGAP3Q9NP61 516 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 CASS4Q9NQ75 786 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 EIF2B3Q9NR50 452 aaKnown RBP8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 PAK5Q9P286 719 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 ZNF624Q9P2J8 865 aaPredicted RBP8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 SATB2Q9UPW6 733 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 RAXQ9Y2V3 346 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 NEU2Q9Y3R4 380 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 PCDHGA7Q9Y5G6 932 aa8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 SNRNP200O75643 2136 aaKnown RBP8.06□□□□□ -1.12
HDGFL3-205ENST00000568129 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 C17orf113A0A1B0GUU1 675 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 RHPN2P1A8MT19 583 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 NVLO15381 856 aaKnown RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 BUD23O43709 281 aaKnown RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 MTX2O75431 263 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 POP7O75817 140 aaKnown RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 KRT37O76014 449 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 PRAMEF1O95521 474 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 FGGP02679 453 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 MPOP05164 745 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 ITGA2BP08514 1039 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 HOXB3P14651 431 aaPredicted RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 RPL22P35268 128 aaKnown RBP8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 SLC19A1P41440 591 aa8.05□□□□□ -1.12
HDGFL3-205ENST00000568129 MAGEA6P43360 314 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms