RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	LCN10	Q6JVE6	187 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	RFLNA	Q6ZTI6	216 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	USP45	Q70EL2	814 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	NLRP8	Q86W28	1048 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	GPT2	Q8TD30	523 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	FAM172A	Q8WUF8	416 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	CHTF18	Q8WVB6	975 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	NANOS1	Q8WY41	292 aa	Known RBP	13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	SCRN2	Q96FV2	425 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	CELF6	Q96J87	481 aa	Known RBP	13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	SPATA32	Q96LK8	384 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	NSMCE3	Q96MG7	304 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	LRFN5	Q96NI6	719 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	IP6K3	Q96PC2	410 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	AGAP2	Q99490	1192 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	RAB33B	Q9H082	229 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	KCND1	Q9NSA2	647 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	PKDREJ	Q9NTG1	2253 aa		13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.52	□□□□□ -0.25
SMG1-213	ENST00000567737	PTPN9	P43378	593 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	TSFM	P43897	325 aa	Known RBP	13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	CLCNKA	P51800	687 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	TUBB4B	P68371	445 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	APBA1	Q02410	837 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	TUBB2A	Q13885	445 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	DCAF10	Q5QP82	559 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	BLOC1S3	Q6QNY0	202 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	FAM180A	Q6UWF9	173 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	RPTN	Q6XPR3	784 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	ZNF765	Q7L2R6	523 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	KMT5C	Q86Y97	462 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	DSEL	Q8IZU8	1212 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	AOPEP	Q8N6M6	819 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	OR8K5	Q8NH50	307 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	PPP4R1	Q8TF05	950 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	COG1	Q8WTW3	980 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	CPT1B	Q92523	772 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	C14orf79	Q96F83	325 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	CCDC120	Q96HB5	630 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	AGAP3	Q96P47	875 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	TUBB2B	Q9BVA1	445 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	KLC4	Q9NSK0	619 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	POT1	Q9NUX5	634 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	SEMA5B	Q9P283	1151 aa		13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.51	□□□□□ -0.25
SMG1-213	ENST00000567737	TTC24	A2A3L6	582 aa	Predicted RBP	13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	FOXN3	O00409	490 aa	Predicted RBP	13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	PEX12	O00623	359 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	GRID2	O43424	1007 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	JRK	O75564	520 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	PNMA6A	P0CW24	399 aa	Predicted RBP	13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	PPP1CA	P62136	330 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	PTPRR	Q15256	657 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	PLEKHS1	Q5SXH7	462 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	LRRC66	Q68CR7	880 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	FCRL6	Q6DN72	434 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	MTFR2	Q6P444	385 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	MRGPRE	Q86SM8	312 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	RBM12B	Q8IXT5	1001 aa	Known RBP	13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	SLC38A9	Q8NBW4	561 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	CLIP3	Q96DZ5	547 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	SLX1A	Q9BQ83	275 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	RIOK2	Q9BVS4	552 aa	Known RBP	13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	SLC39A8	Q9C0K1	460 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	GOLPH3L	Q9H4A5	285 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	OLAH	Q9NV23	265 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	PADI2	Q9Y2J8	665 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	SIK3	Q9Y2K2	1263 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737	CSAG2	Q9Y5P2	127 aa		13.5	□□□□□ -0.25
SMG1-213	ENST00000567737		A0A0U1RQS6	177 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	C2CD4B	A6NLJ0	364 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	PDZK1P1	A8MUH7	402 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	SMC2	O95347	1197 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	LSM8	O95777	96 aa	Known RBP	13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	CYP11B1	P15538	503 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	CTPS1	P17812	591 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	PPP1R2	P41236	205 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	ART1	P52961	327 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	TPI1	P60174	286 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	HSD11B2	P80365	405 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	GUCA2A	Q02747	115 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	TLE4	Q04727	773 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	GPR18	Q14330	331 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	NCF4	Q15080	339 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	GPR19	Q15760	415 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	ASIC2	Q16515	512 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	TAF3	Q5VWG9	929 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	KLHL10	Q6JEL2	608 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	TTI2	Q6NXR4	508 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	SCYL2	Q6P3W7	929 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	FAM198B	Q6UWH4	519 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	CERS6	Q6ZMG9	384 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	GBP6	Q6ZN66	633 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	NDUFAF2	Q8N183	169 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	TTC30B	Q8N4P2	665 aa		13.49	□□□□□ -0.25

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