RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 POU2F1P14859 743 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 KIR3DL1P43629 444 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 PLEKHG6Q3KR16 790 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 TNFAIP8L3Q5GJ75 292 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF773Q6PK81 442 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 OR5K1Q8NHB7 308 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 EMILIN2Q9BXX0 1053 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 DUSP16Q9BY84 665 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLITRK2Q9H156 845 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 POLE3Q9NRF9 147 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 MYH6P13533 1939 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 RFPL1O75677 317 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 YES1P07947 543 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 LPOP22079 712 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 GSK3BP49841 420 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 OAZ1P54368 228 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 SNAPC2Q13487 334 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 MEP1AQ16819 746 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 C16orf59Q7L2K0 433 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 FAM35AQ86V20 835 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 RASAL3Q86YV0 1011 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 TRPV1Q8NER1 839 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 FBXO27Q8NI29 283 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 NSMCE3Q96MG7 304 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 GPR21Q99679 349 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 LRRC3Q9BY71 257 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZYG11BQ9C0D3 744 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 SOX17Q9H6I2 414 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF696Q9H7X3 374 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 AASDHPPTQ9NRN7 309 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 VPS4AQ9UN37 437 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 CORO2BQ9UQ03 480 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 STON1Q9Y6Q2 735 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 H3BNH8 94 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 M0QX08 132 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 BMP10O95393 424 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 FGF3P11487 239 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 MYL9P24844 172 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLC15A1P46059 708 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 PSMD4P55036 377 aaKnown RBP12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 BCL2L1Q07817 233 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 COMMD9Q9P000 198 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 CDC14AQ9UNH5 594 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 ARHGEF33A8MVX0 844 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZBTB7AO95365 584 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 UROSP10746 265 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 CPT1AP50416 773 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 HKDC1Q2TB90 917 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 PRR23CQ6ZRP0 262 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 C2orf69Q8N8R5 385 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 REPS1Q96D71 796 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 AKTIPQ9H8T0 292 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZSCAN32Q9NX65 697 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 RPS6KB2Q9UBS0 482 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 TESMINQ9Y4I5 508 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 PMM2O15305 246 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 ORC5O43913 435 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 FAM189A1O60320 539 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 ABCB7O75027 752 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 FGF1P05230 155 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 PRKCHP24723 683 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 MC4RP32245 332 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 PTPN9P43378 593 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 VBP1P61758 197 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLC39A12Q504Y0 691 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 TMEM126BQ8IUX1 230 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF384Q8TF68 577 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 PPP1R13LQ8WUF5 828 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 COLEC11Q9BWP8 271 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 GSDMCQ9BYG8 508 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 IPPKQ9H8X2 491 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 PCDHB5Q9Y5E4 795 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 ABCC6O95255 1503 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 COL14A1Q05707 1796 aaKnown RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 PRAMEF33A0A0G2JMD5 474 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 A8MV72 311 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 DENRO43583 198 aaKnown RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 PRAMEF10O60809 474 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 CYP11A1P05108 521 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 PSKH1P11801 424 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 CDH1P12830 882 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 PKMP14618 531 aaKnown RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 GM2AP17900 193 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 TNNI3P19429 210 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 CCR10P46092 362 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 SUZ12Q15022 739 aaKnown RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 FAM174BQ3ZCQ3 159 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 TRIM40Q6P9F5 258 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 KBTBD7Q8WVZ9 684 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 EIF2B3Q9NR50 452 aaKnown RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 MKL2Q9ULH7 1088 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 A0A1W2PRG6 482 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 SPATA31C2B4DYI2 1134 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 I3L521 148 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 ARF4P18085 180 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 CES1P23141 567 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 SMIM11AP58511 58 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 HSF2Q03933 536 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms