RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SYBUQ9NX95 663 aa12.25□□□□□ -0.45
RNF40-211ENST00000567365 TAAR2Q9P1P5 351 aa12.25□□□□□ -0.45
RNF40-211ENST00000567365 PRKAB1Q9Y478 270 aa12.25□□□□□ -0.45
RNF40-211ENST00000567365 TPRP12270 2363 aaKnown RBP12.25□□□□□ -0.45
RNF40-211ENST00000567365 CCDC78A2IDD5 438 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 CDK14O94921 469 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 TUBB4AP04350 444 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 ITGALP20701 1170 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 CACNG1Q06432 222 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 DMPKQ09013 629 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 HLTFQ14527 1009 aaKnown RBP eCLIP12.24□□□□□ -0.45
RNF40-211ENST00000567365 ZNF658BQ4V348 819 aaPredicted RBP12.24□□□□□ -0.45
RNF40-211ENST00000567365 GUSBP11Q6P575 273 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 HOOK3Q86VS8 718 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 SERPINA9Q86WD7 417 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 NAGSQ8N159 534 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 MPP5Q8N3R9 675 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 ARL10Q8N8L6 244 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 PNPLA1Q8N8W4 532 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 HDAC10Q969S8 669 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 ULK4Q96C45 1275 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 LINC00615Q96LM1 132 aaPredicted RBP12.24□□□□□ -0.45
RNF40-211ENST00000567365 KRT12Q99456 494 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 TIMM29Q9BSF4 260 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 TRIM51Q9BSJ1 452 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 ZDHHC3Q9NYG2 299 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 NCKIPSDQ9NZQ3 722 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 BFARQ9NZS9 450 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 ZNHIT2Q9UHR6 403 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 SOX13Q9UN79 622 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 GPR34Q9UPC5 381 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 GPSM3Q9Y4H4 160 aa12.24□□□□□ -0.45
RNF40-211ENST00000567365 ACACBO00763 2458 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 FAM221BA6H8Z2 402 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 OR51F1A6NGY5 319 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 KMOO15229 486 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 SEC31AO94979 1220 aaKnown RBP12.23□□□□□ -0.45
RNF40-211ENST00000567365 TRIM16O95361 564 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 GP1BAP07359 652 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 ACRV1P26436 265 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 NMBRP28336 390 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 ACTR1BP42025 376 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 ARCN1P48444 511 aaKnown RBP12.23□□□□□ -0.45
RNF40-211ENST00000567365 TERF1P54274 439 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 ACTR1AP61163 376 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 SARNPP82979 210 aaKnown RBP12.23□□□□□ -0.45
RNF40-211ENST00000567365 SEMA3AQ14563 771 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 MORF4L2Q15014 288 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 NR0B2Q15466 257 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 SMAD1Q15797 465 aaKnown RBP12.23□□□□□ -0.45
RNF40-211ENST00000567365 DBN1Q16643 649 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 BCL7AQ4VC05 210 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 SLC30A9Q6PML9 568 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 CHST15Q7LFX5 561 aaPredicted RBP12.23□□□□□ -0.45
RNF40-211ENST00000567365 ZNF438Q7Z4V0 828 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 TMEM135Q86UB9 458 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 LRRTM4Q86VH4 590 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 PPHLN1Q8NEY8 458 aaKnown RBP12.23□□□□□ -0.45
RNF40-211ENST00000567365 PATE1Q8WXA2 126 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 SCG3Q8WXD2 468 aaKnown RBP12.23□□□□□ -0.45
RNF40-211ENST00000567365 MFSD3Q96ES6 412 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 ZNF514Q96K75 400 aaPredicted RBP12.23□□□□□ -0.45
RNF40-211ENST00000567365 FAM96AQ9H5X1 160 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 TBC1D29Q9UFV1 150 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 ASIC3Q9UHC3 531 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 ANGPTL2Q9UKU9 493 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 APOBEC2Q9Y235 224 aaKnown RBP12.23□□□□□ -0.45
RNF40-211ENST00000567365 DNMT3AQ9Y6K1 912 aaPredicted RBP12.23□□□□□ -0.45
RNF40-211ENST00000567365 SLC30A1Q9Y6M5 507 aa12.23□□□□□ -0.45
RNF40-211ENST00000567365 FAM237BA0A1B0GVD1 139 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 BHMG1C9JSJ3 638 aaPredicted RBP12.22□□□□□ -0.45
RNF40-211ENST00000567365 GOLGA8MH3BSY2 632 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 KIF2AO00139 706 aaPredicted RBP12.22□□□□□ -0.45
RNF40-211ENST00000567365 CASC3O15234 703 aaKnown RBP12.22□□□□□ -0.45
RNF40-211ENST00000567365 RAD51CO43502 376 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 RFPL3O75679 317 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 TOP3BO95985 862 aaKnown RBP12.22□□□□□ -0.45
RNF40-211ENST00000567365 GOT2P00505 430 aaKnown RBP12.22□□□□□ -0.45
RNF40-211ENST00000567365 ACP5P13686 325 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 ZNF7P17097 686 aaPredicted RBP12.22□□□□□ -0.45
RNF40-211ENST00000567365 RPL21P46778 160 aaKnown RBP12.22□□□□□ -0.45
RNF40-211ENST00000567365 PRLHRP49683 370 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 DUSP3P51452 185 aaPredicted RBP12.22□□□□□ -0.45
RNF40-211ENST00000567365 SHC2P98077 582 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 C2orf54Q08AI8 447 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 ITIH4Q14624 930 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 NR1D2Q14995 579 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 WHAMMP3Q1A5X7 153 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 MSS51Q4VC12 460 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 C14orf28Q4W4Y0 310 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 PERM1Q5SV97 790 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 IZUMO3Q5VZ72 239 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 HIBCHQ6NVY1 386 aaPredicted RBP12.22□□□□□ -0.45
RNF40-211ENST00000567365 TMEM220Q6QAJ8 160 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 AFTPHQ6ULP2 937 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 CRTC3Q6UUV7 619 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 ABRAXAS1Q6UWZ7 409 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 WASH2PQ6VEQ5 465 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 PACS1Q6VY07 963 aa12.22□□□□□ -0.45
RNF40-211ENST00000567365 EFL1Q7Z2Z2 1120 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms