RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 C11orf96Q7Z7L8 435 aa21.33■■□□□ 1.01
NME3-210ENST00000567271 TRAPPC5Q8IUR0 188 aa21.33■■□□□ 1.01
NME3-210ENST00000567271 NXPE1Q8N323 547 aa21.33■■□□□ 1.01
NME3-210ENST00000567271 OR13J1Q8NGT2 312 aa21.33■■□□□ 1.01
NME3-210ENST00000567271 DDX47Q9H0S4 455 aaKnown RBP21.33■■□□□ 1.01
NME3-210ENST00000567271 LRIT1Q9P2V4 623 aa21.33■■□□□ 1.01
NME3-210ENST00000567271 TBC1D29Q9UFV1 150 aa21.33■■□□□ 1.01
NME3-210ENST00000567271 TCAF1Q9Y4C2 921 aa21.33■■□□□ 1.01
NME3-210ENST00000567271 PLXNB3Q9ULL4 1909 aa21.33■■□□□ 1
NME3-210ENST00000567271 RP1P56715 2156 aa21.33■■□□□ 1
NME3-210ENST00000567271 KNTC1P50748 2209 aa21.32■■□□□ 1
NME3-210ENST00000567271 TRBV5-4A0A0C4DH59 114 aa21.32■■□□□ 1
NME3-210ENST00000567271 A6NCN8 305 aa21.32■■□□□ 1
NME3-210ENST00000567271 MT-CO3P00414 261 aa21.32■■□□□ 1
NME3-210ENST00000567271 AKT1P31749 480 aa21.32■■□□□ 1
NME3-210ENST00000567271 NPY2RP49146 381 aa21.32■■□□□ 1
NME3-210ENST00000567271 CTSCP53634 463 aa21.32■■□□□ 1
NME3-210ENST00000567271 TERF1P54274 439 aa21.32■■□□□ 1
NME3-210ENST00000567271 SESN2P58004 480 aaPredicted RBP21.32■■□□□ 1
NME3-210ENST00000567271 ETF1P62495 437 aaKnown RBP21.32■■□□□ 1
NME3-210ENST00000567271 INSCQ1MX18 579 aa21.32■■□□□ 1
NME3-210ENST00000567271 PLA2G4EQ3MJ16 856 aa21.32■■□□□ 1
NME3-210ENST00000567271 ZRANB3Q5FWF4 1079 aa21.32■■□□□ 1
NME3-210ENST00000567271 PCID2Q5JVF3 399 aa21.32■■□□□ 1
NME3-210ENST00000567271 TMEM220Q6QAJ8 160 aa21.32■■□□□ 1
NME3-210ENST00000567271 ZNF534Q76KX8 674 aa21.32■■□□□ 1
NME3-210ENST00000567271 NLRP9Q7RTR0 991 aa21.32■■□□□ 1
NME3-210ENST00000567271 DCBLD1Q8N8Z6 715 aa21.32■■□□□ 1
NME3-210ENST00000567271 CPT1BQ92523 772 aa21.32■■□□□ 1
NME3-210ENST00000567271 ZNF778Q96MU6 729 aa21.32■■□□□ 1
NME3-210ENST00000567271 RNF14Q9UBS8 474 aa21.32■■□□□ 1
NME3-210ENST00000567271 SLC2A6Q9UGQ3 507 aa21.32■■□□□ 1
NME3-210ENST00000567271 CLCA2Q9UQC9 943 aa21.32■■□□□ 1
NME3-210ENST00000567271 AKAP13Q12802 2813 aa21.32■■□□□ 1
NME3-210ENST00000567271 CHD8Q9HCK8 2581 aa21.32■■□□□ 1
NME3-210ENST00000567271 PRR19A6NJB7 356 aa21.31■■□□□ 1
NME3-210ENST00000567271 CASC3O15234 703 aaKnown RBP21.31■■□□□ 1
NME3-210ENST00000567271 PRSS56P0CW18 603 aa21.31■■□□□ 1
NME3-210ENST00000567271 CDKN1CP49918 316 aaPredicted RBP21.31■■□□□ 1
NME3-210ENST00000567271 B4GALNT1Q00973 533 aa21.31■■□□□ 1
NME3-210ENST00000567271 ACVR1Q04771 509 aa21.31■■□□□ 1
NME3-210ENST00000567271 CACNG1Q06432 222 aa21.31■■□□□ 1
NME3-210ENST00000567271 TARDBPQ13148 414 aaKnown RBP eCLIP21.31■■□□□ 1
NME3-210ENST00000567271 ANKRD22Q5VYY1 191 aa21.31■■□□□ 1
NME3-210ENST00000567271 IYDQ6PHW0 289 aa21.31■■□□□ 1
NME3-210ENST00000567271 SFRP1Q8N474 314 aa21.31■■□□□ 1
NME3-210ENST00000567271 PPHLN1Q8NEY8 458 aaKnown RBP21.31■■□□□ 1
NME3-210ENST00000567271 WDR48Q8TAF3 677 aa21.31■■□□□ 1
NME3-210ENST00000567271 SLCO2A1Q92959 643 aa21.31■■□□□ 1
NME3-210ENST00000567271 PEX13Q92968 403 aa21.31■■□□□ 1
NME3-210ENST00000567271 ZNF514Q96K75 400 aaPredicted RBP21.31■■□□□ 1
NME3-210ENST00000567271 COPS8Q99627 209 aa21.31■■□□□ 1
NME3-210ENST00000567271 TMEM121BQ9BXQ6 578 aaPredicted RBP21.31■■□□□ 1
NME3-210ENST00000567271 IL22Q9GZX6 179 aa21.31■■□□□ 1
NME3-210ENST00000567271 CHRAC1Q9NRG0 131 aa21.31■■□□□ 1
NME3-210ENST00000567271 BFARQ9NZS9 450 aa21.31■■□□□ 1
NME3-210ENST00000567271 PCYOX1Q9UHG3 505 aa21.31■■□□□ 1
NME3-210ENST00000567271 DNMT3AQ9Y6K1 912 aaPredicted RBP21.31■■□□□ 1
NME3-210ENST00000567271 ASPMQ8IZT6 3477 aa21.31■■□□□ 1
NME3-210ENST00000567271 ZFC3H1O60293 1989 aaKnown RBP21.3■■□□□ 1
NME3-210ENST00000567271 TRBV23OR9-2A0A075B6M9 112 aa21.3■■□□□ 1
NME3-210ENST00000567271 CCDC162PA2VCL2 907 aa21.3■■□□□ 1
NME3-210ENST00000567271 OR2AG2A6NM03 316 aa21.3■■□□□ 1
NME3-210ENST00000567271 SNX2O60749 519 aa21.3■■□□□ 1
NME3-210ENST00000567271 KCNJ13O60928 360 aa21.3■■□□□ 1
NME3-210ENST00000567271 POP7O75817 140 aaKnown RBP21.3■■□□□ 1
NME3-210ENST00000567271 PAFAH1B1P43034 410 aa21.3■■□□□ 1
NME3-210ENST00000567271 SARNPP82979 210 aaKnown RBP21.3■■□□□ 1
NME3-210ENST00000567271 CAMK2BQ13554 666 aa21.3■■□□□ 1
NME3-210ENST00000567271 DET1Q7L5Y6 550 aa21.3■■□□□ 1
NME3-210ENST00000567271 TAS2R42Q7RTR8 314 aa21.3■■□□□ 1
NME3-210ENST00000567271 ZNF438Q7Z4V0 828 aa21.3■■□□□ 1
NME3-210ENST00000567271 SERPINA9Q86WD7 417 aa21.3■■□□□ 1
NME3-210ENST00000567271 PIANPQ8IYJ0 282 aa21.3■■□□□ 1
NME3-210ENST00000567271 HEXDCQ8WVB3 486 aa21.3■■□□□ 1
NME3-210ENST00000567271 GATA6Q92908 595 aa21.3■■□□□ 1
NME3-210ENST00000567271 HDAC10Q969S8 669 aa21.3■■□□□ 1
NME3-210ENST00000567271 SGF29Q96ES7 293 aa21.3■■□□□ 1
NME3-210ENST00000567271 CCDC97Q96F63 343 aaPredicted RBP21.3■■□□□ 1
NME3-210ENST00000567271 DCUN1D1Q96GG9 259 aa21.3■■□□□ 1
NME3-210ENST00000567271 PRDM8Q9NQV8 689 aa21.3■■□□□ 1
NME3-210ENST00000567271 ZDHHC3Q9NYG2 299 aa21.3■■□□□ 1
NME3-210ENST00000567271 DNAJC16Q9Y2G8 782 aa21.3■■□□□ 1
NME3-210ENST00000567271 IGLV3-16A0A075B6K0 115 aa21.29■■□□□ 1
NME3-210ENST00000567271 RHPN2P1A8MT19 583 aa21.29■■□□□ 1
NME3-210ENST00000567271 PPM1DO15297 605 aa21.29■■□□□ 1
NME3-210ENST00000567271 TMEM63AO94886 807 aa21.29■■□□□ 1
NME3-210ENST00000567271 RALBP11234 206 aa21.29■■□□□ 1
NME3-210ENST00000567271 F3P13726 295 aa21.29■■□□□ 1
NME3-210ENST00000567271 VCLP18206 1134 aa21.29■■□□□ 1
NME3-210ENST00000567271 ACRV1P26436 265 aa21.29■■□□□ 1
NME3-210ENST00000567271 CASQ1P31415 396 aa21.29■■□□□ 1
NME3-210ENST00000567271 PTGIRP43119 386 aa21.29■■□□□ 1
NME3-210ENST00000567271 CRADDP78560 199 aa21.29■■□□□ 1
NME3-210ENST00000567271 CCL7P80098 99 aa21.29■■□□□ 1
NME3-210ENST00000567271 NR1D2Q14995 579 aa21.29■■□□□ 1
NME3-210ENST00000567271 PPP1R7Q15435 360 aa21.29■■□□□ 1
NME3-210ENST00000567271 FNBP1LQ5T0N5 605 aa21.29■■□□□ 1
NME3-210ENST00000567271 AMZ2Q86W34 360 aa21.29■■□□□ 1
NME3-210ENST00000567271 Q8N9G6 341 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms